Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL138726.1-201ENST00000614873 333 ntBASIC2.27□□□□□ -2.05
SOX3P41225 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC131280.1-202ENST00000624067 4211 ntBASIC2.27□□□□□ -2.05
SOX3P41225 MTND5P30-201ENST00000452896 1731 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SOX3P41225 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.27□□□□□ -2.05
SOX3P41225 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.27□□□□□ -2.05
SOX3P41225 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
SOX3P41225 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SOX3P41225 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 Y_RNA.88-201ENST00000363029 99 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
SOX3P41225 Y_RNA.212-201ENST00000364177 102 ntBASIC2.26□□□□□ -2.05
SOX3P41225 Y_RNA.301-201ENST00000364990 103 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RNY3P14-201ENST00000384309 102 ntBASIC2.26□□□□□ -2.05
SOX3P41225 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AL445529.1-201ENST00000398713 389 ntBASIC2.26□□□□□ -2.05
SOX3P41225 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.26□□□□□ -2.05
SOX3P41225 RPL21P111-201ENST00000418453 477 ntBASIC2.26□□□□□ -2.05
SOX3P41225 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX3P41225 UBE2V1P4-201ENST00000425374 344 ntBASIC2.26□□□□□ -2.05
SOX3P41225 Z98742.2-201ENST00000431564 187 ntBASIC2.26□□□□□ -2.05
SOX3P41225 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 RNU6-1037P-201ENST00000459571 107 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RNU6-329P-201ENST00000459618 107 ntBASIC2.26□□□□□ -2.05
SOX3P41225 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX3P41225 RPL36AP48-201ENST00000485521 314 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RPL23AP49-201ENST00000492925 468 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AK3P2-201ENST00000507976 429 ntBASIC2.26□□□□□ -2.05
SOX3P41225 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
SOX3P41225 AC025465.4-201ENST00000513422 638 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC046134.1-201ENST00000514454 666 ntBASIC2.26□□□□□ -2.05
SOX3P41225 SNORA20.3-201ENST00000516880 132 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.26□□□□□ -2.05
SOX3P41225 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX3P41225 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC010186.2-204ENST00000537668 439 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC079598.5-201ENST00000547460 117 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC026371.1-201ENST00000551867 419 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC090897.2-201ENST00000581715 130 ntBASIC2.26□□□□□ -2.05
SOX3P41225 MIR4765-201ENST00000585007 77 ntBASIC2.26□□□□□ -2.05
SOX3P41225 MIR3942-201ENST00000585264 109 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC023043.2-201ENST00000589678 1026 ntBASIC2.26□□□□□ -2.05
SOX3P41225 RPS15AP11-201ENST00000594193 385 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC009314.1-201ENST00000603871 304 ntBASIC2.26□□□□□ -2.05
SOX3P41225 ELOCP5-201ENST00000604924 333 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX3P41225 AC244517.12-201ENST00000623581 663 ntBASIC2.26□□□□□ -2.05
SOX3P41225 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
SOX3P41225 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.26□□□□□ -2.05
SOX3P41225 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX3P41225 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SOX3P41225 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
SOX3P41225 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SOX3P41225 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
SOX3P41225 Y_RNA.135-201ENST00000363439 95 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RNU1-51P-201ENST00000365345 176 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RNU6-767P-201ENST00000384132 107 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RNU6-1013P-201ENST00000384180 107 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RNU6-1106P-201ENST00000390845 107 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RNU6-293P-201ENST00000411259 106 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.25□□□□□ -2.05
SOX3P41225 AC097463.2-201ENST00000421074 142 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AL645568.3-201ENST00000433683 316 ntBASIC2.25□□□□□ -2.05
SOX3P41225 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC243964.1-201ENST00000441814 261 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.25□□□□□ -2.05
SOX3P41225 RPL7P12-201ENST00000446719 750 ntBASIC2.25□□□□□ -2.05
SOX3P41225 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.25□□□□□ -2.05
SOX3P41225 AC109329.1-201ENST00000518744 317 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
SOX3P41225 BNIP3P16-201ENST00000589779 534 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC022306.2-201ENST00000617563 647 ntBASIC2.25□□□□□ -2.05
SOX3P41225 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.25□□□□□ -2.05
SOX3P41225 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SOX3P41225 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.24□□□□□ -2.05
SOX3P41225 CBX3P1-201ENST00000325243 554 ntBASIC2.24□□□□□ -2.05
SOX3P41225 RNU6-1010P-201ENST00000362757 107 ntBASIC2.24□□□□□ -2.05
SOX3P41225 SNORD114-19-201ENST00000363072 75 ntBASIC2.24□□□□□ -2.05
SOX3P41225 RNA5SP126-201ENST00000365092 109 ntBASIC2.24□□□□□ -2.05
SOX3P41225 SNORD116-11-201ENST00000383882 92 ntBASIC2.24□□□□□ -2.05
SOX3P41225 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SOX3P41225 RNA5SP508-201ENST00000411327 119 ntBASIC2.24□□□□□ -2.05
SOX3P41225 MTND3P8-201ENST00000412909 339 ntBASIC2.24□□□□□ -2.05
SOX3P41225 RPS15AP10-201ENST00000432472 382 ntBASIC2.24□□□□□ -2.05
SOX3P41225 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.24□□□□□ -2.05
SOX3P41225 MTND4LP16-201ENST00000440828 295 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.24□□□□□ -2.05
SOX3P41225 PMCHL2-203ENST00000457791 237 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AC018437.1-201ENST00000492214 406 ntBASIC2.24□□□□□ -2.05
SOX3P41225 RPL22P13-201ENST00000493291 347 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms