Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ERLEC1P1-201ENST00000433806 578 ntBASIC2.57□□□□□ -2
CAPN3P20807 AL513328.1-201ENST00000446460 224 ntBASIC2.57□□□□□ -2
CAPN3P20807 AL353752.1-201ENST00000454946 260 ntBASIC2.57□□□□□ -2
CAPN3P20807 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
CAPN3P20807 U8.21-201ENST00000459536 136 ntBASIC2.57□□□□□ -2
CAPN3P20807 AC087884.1-201ENST00000469738 328 ntBASIC2.57□□□□□ -2
CAPN3P20807 HMGB1P35-201ENST00000503360 598 ntBASIC2.57□□□□□ -2
CAPN3P20807 AC114801.2-201ENST00000503825 781 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU1-41P-201ENST00000516161 162 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU1-48P-201ENST00000516400 162 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU6-1069P-201ENST00000516612 133 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU6-567P-201ENST00000516746 107 ntBASIC2.57□□□□□ -2
CAPN3P20807 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.57□□□□□ -2
CAPN3P20807 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
CAPN3P20807 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
CAPN3P20807 MIR4529-201ENST00000578110 78 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
CAPN3P20807 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CAPN3P20807 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.57□□□□□ -2
CAPN3P20807 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
CAPN3P20807 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.57□□□□□ -2
CAPN3P20807 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CAPN3P20807 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
CAPN3P20807 Y_RNA.318-201ENST00000365131 97 ntBASIC2.56□□□□□ -2
CAPN3P20807 RNU6-611P-201ENST00000384276 104 ntBASIC2.56□□□□□ -2
CAPN3P20807 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
CAPN3P20807 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 RNU6-1038P-201ENST00000516516 104 ntBASIC2.56□□□□□ -2
CAPN3P20807 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
CAPN3P20807 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.56□□□□□ -2
CAPN3P20807 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
CAPN3P20807 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
CAPN3P20807 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.56□□□□□ -2
CAPN3P20807 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
CAPN3P20807 AP001836.1-201ENST00000604675 523 ntBASIC2.56□□□□□ -2
CAPN3P20807 AC064807.4-201ENST00000607201 407 ntBASIC2.56□□□□□ -2
CAPN3P20807 FER-210ENST00000628534 558 ntTSL 5 BASIC2.56□□□□□ -2
CAPN3P20807 MIR1321-201ENST00000637766 79 ntBASIC2.56□□□□□ -2
CAPN3P20807 AC121333.1-201ENST00000567488 2709 ntBASIC2.56□□□□□ -2
CAPN3P20807 Y_RNA.9-201ENST00000362354 101 ntBASIC2.55□□□□□ -2
CAPN3P20807 RNU4-20P-201ENST00000365601 151 ntBASIC2.55□□□□□ -2
CAPN3P20807 RNU6-483P-201ENST00000384088 108 ntBASIC2.55□□□□□ -2
CAPN3P20807 SNORA18.3-201ENST00000384122 132 ntBASIC2.55□□□□□ -2
CAPN3P20807 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
CAPN3P20807 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
CAPN3P20807 SNORD23.1-201ENST00000408212 104 ntBASIC2.55□□□□□ -2
CAPN3P20807 RNU4-26P-201ENST00000410270 107 ntBASIC2.55□□□□□ -2
CAPN3P20807 Y_RNA.597-201ENST00000410463 100 ntBASIC2.55□□□□□ -2
CAPN3P20807 AL590135.1-201ENST00000422215 156 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC019205.3-201ENST00000424573 156 ntBASIC2.55□□□□□ -2
CAPN3P20807 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
CAPN3P20807 MTND1P34-201ENST00000438556 671 ntBASIC2.55□□□□□ -2
CAPN3P20807 AL359672.1-201ENST00000442302 409 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC016700.2-201ENST00000446011 156 ntBASIC2.55□□□□□ -2
CAPN3P20807 AL137159.1-201ENST00000452808 512 ntBASIC2.55□□□□□ -2
CAPN3P20807 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
CAPN3P20807 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC132942.1-201ENST00000486753 483 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC015911.1-201ENST00000495111 156 ntBASIC2.55□□□□□ -2
CAPN3P20807 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.55□□□□□ -2
CAPN3P20807 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.55□□□□□ -2
CAPN3P20807 RPS27P27-201ENST00000498779 255 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.55□□□□□ -2
CAPN3P20807 RNU6-720P-201ENST00000516363 108 ntBASIC2.55□□□□□ -2
CAPN3P20807 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
CAPN3P20807 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.55□□□□□ -2
CAPN3P20807 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.55□□□□□ -2
CAPN3P20807 EIF1P4-201ENST00000572664 335 ntBASIC2.55□□□□□ -2
CAPN3P20807 AL356575.1-201ENST00000603008 283 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC092954.2-201ENST00000609103 430 ntBASIC2.55□□□□□ -2
CAPN3P20807 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
CAPN3P20807 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
CAPN3P20807 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
CAPN3P20807 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CAPN3P20807 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
CAPN3P20807 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
CAPN3P20807 AP000275.1-201ENST00000411943 390 ntBASIC2.54□□□□□ -2
CAPN3P20807 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.54□□□□□ -2
CAPN3P20807 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.54□□□□□ -2
CAPN3P20807 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
CAPN3P20807 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.54□□□□□ -2
CAPN3P20807 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.54□□□□□ -2
CAPN3P20807 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
CAPN3P20807 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
CAPN3P20807 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.54□□□□□ -2
CAPN3P20807 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
CAPN3P20807 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
CAPN3P20807 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
CAPN3P20807 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
CAPN3P20807 Y_RNA.704-201ENST00000516851 102 ntBASIC2.54□□□□□ -2
CAPN3P20807 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms