Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL158042.1-201ENST00000605338 460 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AP002360.4-201ENST00000606980 481 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC092106.3-201ENST00000611308 722 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC131159.1-201ENST00000621854 213 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC013437.2-201ENST00000639587 677 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.93□□□□□ -2.26
HLA-DQB2P05538 ICE2P2-201ENST00000483823 2787 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 RNU4-92P-201ENST00000363783 136 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 RNU6-1179P-201ENST00000384667 107 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 RPL21P111-201ENST00000418453 477 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC006366.1-201ENST00000422002 759 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.93□□□□□ -2.26
HLA-DQB2P05538 FTH1P25-201ENST00000447665 469 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AL360271.2-201ENST00000447710 161 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.93□□□□□ -2.26
HLA-DQB2P05538 HMGN1P13-201ENST00000505795 138 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 RNU5F-2P-201ENST00000516066 82 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC019176.1-201ENST00000518519 225 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC018889.1-201ENST00000605372 397 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AC012409.4-201ENST00000612923 249 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AL078604.3-201ENST00000615580 211 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 AL138960.2-201ENST00000625145 535 ntBASIC0.93□□□□□ -2.26
HLA-DQB2P05538 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNU6-78P-201ENST00000362897 107 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNU6-757P-201ENST00000410334 100 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 OR2AQ1P-201ENST00000451972 200 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC134050.1-201ENST00000495088 933 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC097473.1-201ENST00000508142 408 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNU1-86P-201ENST00000516108 154 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RN7SKP265-201ENST00000516448 223 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNU7-51P-201ENST00000516560 62 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNU1-107P-201ENST00000516617 154 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC105185.1-201ENST00000518705 535 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC022616.6-201ENST00000520479 119 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 CBX3P8-201ENST00000532412 525 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC069431.2-201ENST00000604149 1099 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AP000484.1-201ENST00000620067 1252 ntBASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.92□□□□□ -2.26
HLA-DQB2P05538 AC100821.1-201ENST00000523153 2479 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 RNU4-15P-201ENST00000362613 141 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 RNU6-360P-201ENST00000390944 104 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 SNORA12-201ENST00000391162 147 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 RAP1BP3-201ENST00000407180 549 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AL161935.2-201ENST00000414627 60 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC123900.1-201ENST00000420390 96 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 MTND5P2-201ENST00000442927 1142 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 RPS27AP8-201ENST00000452665 445 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC034244.1-201ENST00000507687 207 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 RAB11AP2-201ENST00000545905 639 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AL355802.3-201ENST00000607571 545 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC026585.1-201ENST00000619582 524 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 AC095038.3-201ENST00000634439 195 ntBASIC0.91□□□□□ -2.26
HLA-DQB2P05538 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DQB2P05538 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
HLA-DQB2P05538 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HLA-DQB2P05538 Y_RNA.97-201ENST00000363094 102 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RNU6-1285P-201ENST00000363480 105 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RNU4-68P-201ENST00000364314 141 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RNU6-1222P-201ENST00000384615 107 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 MIR222-201ENST00000384992 110 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 EEF1A1P40-201ENST00000412883 573 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 HSPE1P9-201ENST00000440046 311 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 MTND1P18-201ENST00000448191 573 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RPL9P9-202ENST00000466501 579 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC079140.2-201ENST00000506193 142 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC005741.1-201ENST00000511094 432 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RNU6-123P-201ENST00000516163 102 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RNA5SP437-201ENST00000517249 129 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 MTND2P7-201ENST00000521337 640 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.9□□□□□ -2.27
HLA-DQB2P05538 ADI1P3-201ENST00000549509 470 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC090115.3-201ENST00000553218 849 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 HMGB1P33-201ENST00000563485 527 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms