Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP1P03956 AC092325.1-201ENST00000566449 554 ntBASIC1.93□□□□□ -2.1
MMP1P03956 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
MMP1P03956 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MMP1P03956 AC064807.4-201ENST00000607201 407 ntBASIC1.93□□□□□ -2.1
MMP1P03956 AC096772.1-201ENST00000609146 564 ntBASIC1.93□□□□□ -2.1
MMP1P03956 AC104073.3-201ENST00000610942 955 ntBASIC1.93□□□□□ -2.1
MMP1P03956 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP1P03956 ZNF680P1-201ENST00000436625 1469 ntBASIC1.93□□□□□ -2.1
MMP1P03956 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP1P03956 MIR412-201ENST00000362142 91 ntBASIC1.92□□□□□ -2.1
MMP1P03956 Y_RNA.269-201ENST00000364685 89 ntBASIC1.92□□□□□ -2.1
MMP1P03956 RNU6-1029P-201ENST00000384109 107 ntBASIC1.92□□□□□ -2.1
MMP1P03956 RNU6-550P-201ENST00000391057 101 ntBASIC1.92□□□□□ -2.1
MMP1P03956 Y_RNA.623-201ENST00000411128 95 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.92□□□□□ -2.1
MMP1P03956 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP1P03956 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP1P03956 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.92□□□□□ -2.1
MMP1P03956 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.92□□□□□ -2.1
MMP1P03956 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP1P03956 AL161788.1-201ENST00000441805 169 ntBASIC1.92□□□□□ -2.1
MMP1P03956 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MMP1P03956 AC140059.1-201ENST00000489238 361 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.92□□□□□ -2.1
MMP1P03956 HMGB1P29-201ENST00000505659 499 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC104806.1-201ENST00000508720 308 ntBASIC1.92□□□□□ -2.1
MMP1P03956 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AP003392.2-201ENST00000527269 208 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AP005435.4-201ENST00000529514 284 ntBASIC1.92□□□□□ -2.1
MMP1P03956 PSMA3P-201ENST00000555485 635 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC136619.2-201ENST00000563361 631 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP1P03956 AC025678.1-201ENST00000567861 338 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP1P03956 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC008752.3-201ENST00000588113 712 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AL713866.2-201ENST00000603579 219 ntBASIC1.92□□□□□ -2.1
MMP1P03956 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
MMP1P03956 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
MMP1P03956 RNU5A-6P-201ENST00000384136 116 ntBASIC1.91□□□□□ -2.1
MMP1P03956 RNU6-606P-201ENST00000384721 111 ntBASIC1.91□□□□□ -2.1
MMP1P03956 SNORD116-4-201ENST00000384733 96 ntBASIC1.91□□□□□ -2.1
MMP1P03956 OR6C66P-201ENST00000414917 930 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.91□□□□□ -2.1
MMP1P03956 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP1P03956 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
MMP1P03956 MTCO2P7-201ENST00000446518 666 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
MMP1P03956 MTND1P18-201ENST00000448191 573 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP1P03956 NDUFB1P2-201ENST00000449477 176 ntBASIC1.91□□□□□ -2.1
MMP1P03956 TPTE2P5-203ENST00000458118 728 ntBASIC1.91□□□□□ -2.1
MMP1P03956 RNU7-182P-201ENST00000459009 62 ntBASIC1.91□□□□□ -2.1
MMP1P03956 MED28P2-201ENST00000475771 317 ntBASIC1.91□□□□□ -2.1
MMP1P03956 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP1P03956 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP1P03956 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
MMP1P03956 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.91□□□□□ -2.1
MMP1P03956 CBX3P4-201ENST00000538909 354 ntBASIC1.91□□□□□ -2.1
MMP1P03956 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
MMP1P03956 AL136363.2-201ENST00000604173 851 ntBASIC1.91□□□□□ -2.1
MMP1P03956 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
MMP1P03956 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
MMP1P03956 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
MMP1P03956 Y_RNA.1-201ENST00000352915 104 ntBASIC1.9□□□□□ -2.11
MMP1P03956 RNU6-1120P-201ENST00000362988 108 ntBASIC1.9□□□□□ -2.11
MMP1P03956 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
MMP1P03956 Y_RNA.118-201ENST00000363300 101 ntBASIC1.9□□□□□ -2.11
MMP1P03956 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
MMP1P03956 RNU6-384P-201ENST00000364900 104 ntBASIC1.9□□□□□ -2.11
MMP1P03956 Y_RNA.296-201ENST00000364930 108 ntBASIC1.9□□□□□ -2.11
MMP1P03956 SNORA25.9-201ENST00000365087 128 ntBASIC1.9□□□□□ -2.11
MMP1P03956 Y_RNA.381-201ENST00000365666 102 ntBASIC1.9□□□□□ -2.11
MMP1P03956 RNU6-387P-201ENST00000411331 105 ntBASIC1.9□□□□□ -2.11
MMP1P03956 UBE2V1P10-201ENST00000414685 269 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC073464.1-201ENST00000429823 534 ntBASIC1.9□□□□□ -2.11
MMP1P03956 RNU1-86P-201ENST00000516108 154 ntBASIC1.9□□□□□ -2.11
MMP1P03956 RNU1-107P-201ENST00000516617 154 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.9□□□□□ -2.11
MMP1P03956 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.11
MMP1P03956 AC135279.1-201ENST00000543493 504 ntBASIC1.9□□□□□ -2.11
MMP1P03956 MIR4703-201ENST00000577728 79 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC073539.2-201ENST00000597113 165 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC078795.2-201ENST00000602835 1252 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AL138889.2-201ENST00000603883 242 ntBASIC1.9□□□□□ -2.11
MMP1P03956 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AP001596.2-201ENST00000608410 312 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC007684.1-201ENST00000609671 477 ntBASIC1.9□□□□□ -2.11
MMP1P03956 AC068792.1-201ENST00000621354 417 ntBASIC1.9□□□□□ -2.11
MMP1P03956 SEPT14P19-203ENST00000633205 211 ntBASIC1.9□□□□□ -2.11
MMP1P03956 MIR3529-201ENST00000637713 78 ntBASIC1.9□□□□□ -2.11
MMP1P03956 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MMP1P03956 RBBP8P1-201ENST00000449447 1844 ntBASIC1.89□□□□□ -2.11
MMP1P03956 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 OR4G2P-201ENST00000328113 903 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU6-858P-201ENST00000362436 107 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU6-942P-201ENST00000363002 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms