Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPS3AP37-201ENST00000419176 745 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AL365338.1-201ENST00000422282 858 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC011233.1-201ENST00000422812 283 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC013262.1-201ENST00000426710 252 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 SNRPEP8-201ENST00000442866 260 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC073910.1-201ENST00000445047 438 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 RNU7-59P-201ENST00000459101 61 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 RPL39P38-201ENST00000467018 153 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC010468.3-201ENST00000508225 458 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MTCO3P28-201ENST00000513351 515 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 SNORA31.4-201ENST00000516049 129 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MTND1P36-201ENST00000522384 936 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MIR1273C-201ENST00000578669 77 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MIR4742-201ENST00000581069 85 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 BNIP3P8-201ENST00000597863 560 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC007792.1-201ENST00000623023 402 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MIR6516-201ENST00000630554 81 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 MTND5P33-201ENST00000571250 1450 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-945P-201ENST00000383947 107 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 SNORD116-20-201ENST00000384529 92 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 MTCO1P3-201ENST00000429327 192 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AL583843.1-201ENST00000456070 346 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 RPS26P45-201ENST00000471748 340 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 MTND1P3-201ENST00000484956 952 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AC005741.1-201ENST00000511094 432 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AL157871.3-201ENST00000557231 293 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AC104072.1-201ENST00000568817 668 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 AC068620.3-201ENST00000602749 560 ntBASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV3S1A0A5B6 Y_RNA.33-201ENST00000362591 102 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 SNORA12-201ENST00000391162 147 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 MIR942-201ENST00000401111 86 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 RNA5SP111-201ENST00000411386 101 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 BX664727.1-201ENST00000416024 466 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 ARL5AP1-201ENST00000418991 388 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AL122001.1-201ENST00000457027 370 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 ATP5EP1-201ENST00000510257 156 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-150P-201ENST00000516237 95 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AP001893.2-201ENST00000526949 202 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC021506.2-201ENST00000612354 169 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC083806.3-201ENST00000614016 455 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC126177.8-201ENST00000618339 1015 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AL158163.2-201ENST00000619110 700 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC068787.1-201ENST00000623908 691 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 AC231657.1-201ENST00000624313 397 ntBASIC0.21□□□□□ -2.38
TCRBV3S1A0A5B6 MTND4P14-201ENST00000435799 1354 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 SNORD3E-201ENST00000362899 217 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RNU5B-1-201ENST00000363286 116 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RNU1-96P-201ENST00000364163 162 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 Y_RNA.595-201ENST00000410403 105 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 ELOCP9-201ENST00000418624 239 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 MTCO3P29-201ENST00000432119 779 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AC245047.7-201ENST00000440265 293 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 ATP5J2P3-201ENST00000451550 258 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AC024589.1-201ENST00000512207 263 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-1225P-201ENST00000516336 65 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-914P-201ENST00000516749 109 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 SUMO2P16-201ENST00000519475 264 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AC092451.2-201ENST00000538746 658 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 SNORA59B-202ENST00000578183 701 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 FAM106DP-201ENST00000586416 501 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AC068790.6-201ENST00000602558 258 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AL445435.1-201ENST00000604232 665 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 RPL21P136-201ENST00000605378 396 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 MTND5P42-201ENST00000637720 498 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 AL159152.1-201ENST00000635019 2587 ntBASIC0.2□□□□□ -2.38
TCRBV3S1A0A5B6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-1123P-201ENST00000362347 106 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU4-15P-201ENST00000362613 141 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-289P-201ENST00000364093 107 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-321P-201ENST00000410912 106 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 Y_RNA.623-201ENST00000411128 95 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 BTF3L4P1-201ENST00000413813 468 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms