Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AP002360.4-201ENST00000606980 481 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 RNU6-1179P-201ENST00000384667 107 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 MIR578-201ENST00000384828 96 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 RPS15AP12-201ENST00000419498 388 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AL590556.1-201ENST00000423231 483 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 RPL30P7-201ENST00000479312 323 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 HMGN1P13-201ENST00000505795 138 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 SNORA3.4-201ENST00000515969 96 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 RNA5SP490-201ENST00000517141 136 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 MIR3118-1-201ENST00000581787 76 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 DEFB131E-202ENST00000602581 683 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AL158042.1-201ENST00000605338 460 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC016727.1-205ENST00000605437 569 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC092106.3-201ENST00000611308 722 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC092140.2-201ENST00000618027 521 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AP002782.1-201ENST00000623107 614 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC120349.3-201ENST00000624377 529 ntBASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.99□□□□□ -2.25
HDGFL3Q9Y3E1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 SNRPEP10-201ENST00000420249 274 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 TOMM22P2-201ENST00000430735 237 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AL135790.2-201ENST00000437701 267 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 MTND1P30-201ENST00000441241 901 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 CR769776.1-201ENST00000441254 787 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 RNU5F-2P-201ENST00000516066 82 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 RNU7-51P-201ENST00000516560 62 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 RAB11AP2-201ENST00000545905 639 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 MIR5094-201ENST00000578766 85 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC098848.2-201ENST00000588023 330 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC018889.1-201ENST00000605372 397 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC013244.3-201ENST00000605614 388 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AC131159.1-201ENST00000621854 213 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 AL138960.2-201ENST00000625145 535 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 ICE2P2-201ENST00000483823 2787 ntBASIC0.98□□□□□ -2.25
HDGFL3Q9Y3E1 MTND4P16-201ENST00000466108 1367 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 MIR340-201ENST00000362125 95 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 RNU4-68P-201ENST00000364314 141 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 Y_RNA.338-201ENST00000365320 114 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 RNU6-360P-201ENST00000390944 104 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 RAP1BP3-201ENST00000407180 549 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 OR6C66P-201ENST00000414917 930 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 MTND5P2-201ENST00000442927 1142 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 FTH1P25-201ENST00000447665 469 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AL360271.2-201ENST00000447710 161 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC134050.1-201ENST00000495088 933 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC097473.1-201ENST00000508142 408 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC108078.2-201ENST00000510750 236 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC105185.1-201ENST00000518705 535 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC121334.2-201ENST00000605387 271 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC097478.2-201ENST00000610572 514 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AC012409.4-201ENST00000612923 249 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 AL078604.3-201ENST00000615580 211 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 MIR8063-201ENST00000621930 81 ntBASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.97□□□□□ -2.25
HDGFL3Q9Y3E1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC073343.1-201ENST00000328239 651 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 SNORD33-201ENST00000362761 85 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 RNU6-1222P-201ENST00000384615 107 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 RNU6-757P-201ENST00000410334 100 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC123900.1-201ENST00000420390 96 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 RPS27AP8-201ENST00000452665 445 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 TRMT112P2-201ENST00000512910 132 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 RNU1-86P-201ENST00000516108 154 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 RNU1-107P-201ENST00000516617 154 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC022616.6-201ENST00000520479 119 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 ADI1P3-201ENST00000549509 470 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC069431.2-201ENST00000604149 1099 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AL158032.1-201ENST00000605401 106 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AC026585.1-201ENST00000619582 524 ntBASIC0.96□□□□□ -2.26
HDGFL3Q9Y3E1 AP000484.1-201ENST00000620067 1252 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms