Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.326-201ENST00000365176 113 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 SNORA29-201ENST00000384183 140 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 MIR186-201ENST00000384988 86 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RNU6-308P-201ENST00000390957 107 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 SNORA26.3-201ENST00000391119 136 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AC097463.2-201ENST00000421074 142 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL358453.1-201ENST00000422522 250 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL035666.1-201ENST00000446195 348 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RBMY2UP-201ENST00000453474 324 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL163540.1-201ENST00000485382 386 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RPL23AP75-201ENST00000491601 451 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RPL22P13-201ENST00000493291 347 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.661-201ENST00000516003 99 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL590705.4-201ENST00000532209 134 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 MIR4765-201ENST00000585007 77 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RPL23AP88-201ENST00000605759 454 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AC091925.1-201ENST00000623204 462 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 SCARNA4-201ENST00000629045 128 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 AL450472.1-202ENST00000637286 180 ntBASIC3.3□□□□□ -1.88
MKS1Q9NXB0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
MKS1Q9NXB0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RNU1-70P-201ENST00000362618 164 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 U3.13-201ENST00000364804 214 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.496-201ENST00000384444 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AL590004.1-201ENST00000405321 300 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RNA5SP494-201ENST00000410653 129 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC008267.5-201ENST00000424928 265 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 RPL7P2-201ENST00000427639 268 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC099799.1-201ENST00000439809 192 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC009296.1-201ENST00000443146 155 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 CYCSP35-201ENST00000451978 304 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 FTH1P2-201ENST00000466086 412 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AF186996.7-201ENST00000492781 209 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 SNORA25.11-201ENST00000515935 105 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 SNORD116.3-201ENST00000517176 78 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AC021231.3-201ENST00000558497 370 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 7SK.7-201ENST00000603504 247 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.29□□□□□ -1.88
MKS1Q9NXB0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.29□□□□□ -1.88
MKS1Q9NXB0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 Z75746.1-201ENST00000440243 2080 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.28-201ENST00000362554 111 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNU4-9P-201ENST00000364951 139 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 SNORA36A-201ENST00000384221 132 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNU6-700P-201ENST00000391043 107 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AL138885.1-201ENST00000405921 675 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 MTCYBP2-201ENST00000407745 171 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AL590135.1-201ENST00000422215 156 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC019205.3-201ENST00000424573 156 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 MTCYBP10-201ENST00000424905 650 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RPS29P7-201ENST00000439662 171 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC016700.2-201ENST00000446011 156 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RN7SL283P-201ENST00000489055 303 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC015911.1-201ENST00000495111 156 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 RN7SKP295-201ENST00000517264 153 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC004584.2-201ENST00000570407 410 ntBASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MKS1Q9NXB0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms