Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SUB1P3-201ENST00000564581 315 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.24□□□□□ -2.05
VGLL1Q99990 MIR5696-201ENST00000578474 85 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 MIR3609-201ENST00000582661 80 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 AC006504.6-201ENST00000590142 199 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 AC024153.1-201ENST00000603103 365 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 MTND4LP5-201ENST00000605152 292 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 AC002076.2-201ENST00000617362 122 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VGLL1Q99990 SCARNA4-202ENST00000625402 129 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.24□□□□□ -2.05
VGLL1Q99990 MTND4P1-201ENST00000457501 1466 ntBASIC2.24□□□□□ -2.05
VGLL1Q99990 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
VGLL1Q99990 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.24□□□□□ -2.05
VGLL1Q99990 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VGLL1Q99990 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.23□□□□□ -2.05
VGLL1Q99990 AL161431.1-201ENST00000618966 4205 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.23□□□□□ -2.05
VGLL1Q99990 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.23□□□□□ -2.05
VGLL1Q99990 MIR22-201ENST00000362190 85 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 Y_RNA.48-201ENST00000362710 103 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 SNORD50.1-201ENST00000362987 71 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 Y_RNA.145-201ENST00000363527 102 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RNU6-105P-201ENST00000363909 104 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RNU1-100P-201ENST00000365255 165 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RNU5E-7P-201ENST00000365290 117 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RNU6-790P-201ENST00000384479 105 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AL591034.2-201ENST00000402839 359 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AC096664.2-201ENST00000411843 406 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 NDUFS5P4-201ENST00000412983 318 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AL451074.5-201ENST00000415894 435 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.23□□□□□ -2.05
VGLL1Q99990 AC005300.1-201ENST00000428401 373 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AC005326.1-201ENST00000429197 123 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RPS15AP10-201ENST00000432472 382 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AL160004.2-201ENST00000432935 350 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 CYCSP32-201ENST00000440548 321 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.23□□□□□ -2.05
VGLL1Q99990 AL590664.1-201ENST00000448065 339 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 HMGN2P10-201ENST00000448085 265 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AC079354.2-201ENST00000453523 154 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.23□□□□□ -2.05
VGLL1Q99990 RPL7P49-201ENST00000471402 708 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RPS29P2-201ENST00000479278 136 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 RNU6-1046P-201ENST00000516538 107 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 SNORD59.2-201ENST00000516873 68 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AP005902.1-201ENST00000521358 186 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 HSPE1P20-201ENST00000538133 289 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.23□□□□□ -2.05
VGLL1Q99990 MIR4680-201ENST00000580906 66 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AC005899.2-201ENST00000584353 90 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 AL451007.1-201ENST00000595491 289 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.23□□□□□ -2.05
VGLL1Q99990 AP001836.1-201ENST00000604675 523 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 MIR92B-201ENST00000607575 96 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.23□□□□□ -2.05
VGLL1Q99990 AC010680.1-201ENST00000590024 3590 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 Z82195.2-201ENST00000612348 18351 ntBASIC2.23□□□□□ -2.05
VGLL1Q99990 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VGLL1Q99990 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
VGLL1Q99990 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.23□□□□□ -2.05
VGLL1Q99990 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
VGLL1Q99990 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VGLL1Q99990 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VGLL1Q99990 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VGLL1Q99990 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
VGLL1Q99990 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 RNU1-115P-201ENST00000365329 160 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 RNU1-109P-201ENST00000383960 147 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 Y_RNA.533-201ENST00000384596 114 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 Y_RNA.645-201ENST00000391229 102 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC023141.4-201ENST00000412031 328 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.22□□□□□ -2.05
VGLL1Q99990 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.22□□□□□ -2.05
VGLL1Q99990 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.22□□□□□ -2.05
VGLL1Q99990 RPS29P6-201ENST00000438196 145 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.22□□□□□ -2.05
VGLL1Q99990 RPL37P4-201ENST00000448908 268 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 CHEK2P4-201ENST00000450340 246 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC010099.1-201ENST00000455434 375 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC091153.1-201ENST00000466297 402 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.22□□□□□ -2.05
VGLL1Q99990 AC068781.1-201ENST00000488231 618 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.22□□□□□ -2.05
VGLL1Q99990 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.22□□□□□ -2.05
VGLL1Q99990 AK3P2-201ENST00000507976 429 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 RNU6-377P-201ENST00000515965 102 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 RNU6-612P-201ENST00000516909 102 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 RNU6-988P-201ENST00000519081 107 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.22□□□□□ -2.05
VGLL1Q99990 AP004607.1-201ENST00000524456 203 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR5680-201ENST00000577577 84 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR5701-3-201ENST00000578890 82 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR4429-201ENST00000580105 73 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR4444-1-201ENST00000581696 74 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR3670-2-201ENST00000582974 65 ntBASIC2.22□□□□□ -2.05
VGLL1Q99990 MIR3670-1-201ENST00000584160 65 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms