Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SNORA31.18-201ENST00000517043 134 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC021739.1-201ENST00000559631 174 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 MIR5696-201ENST00000578474 85 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC078899.3-201ENST00000599065 212 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AL133393.1-201ENST00000603277 287 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC009318.2-201ENST00000610917 651 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AL132822.1-201ENST00000617063 513 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 U4.6-201ENST00000621618 127 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC091953.5-201ENST00000622919 233 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 MIR3199-2-201ENST00000636243 86 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX18Q96RF0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AL136164.4-201ENST00000625013 2135 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 RNU6-858P-201ENST00000362436 107 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 RNU4-42P-201ENST00000364738 142 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 RNU6-198P-201ENST00000384258 104 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 RNU6-196P-201ENST00000384315 107 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 MIR491-201ENST00000384877 84 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 MIR568-201ENST00000385036 95 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 MIR483-201ENST00000385070 76 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 SAR1AP2-201ENST00000392696 594 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AL356968.1-201ENST00000416622 474 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC092423.1-201ENST00000430165 186 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC124916.1-201ENST00000444020 547 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 RNU7-169P-201ENST00000459456 61 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 COX6CP5-201ENST00000527162 228 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC004584.2-201ENST00000570407 410 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 AC113195.1-201ENST00000579952 141 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 MIR4272-201ENST00000635924 64 ntBASIC3.04□□□□□ -1.92
SNX18Q96RF0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX18Q96RF0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 Y_RNA.153-201ENST00000363615 91 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RNU6-595P-201ENST00000363944 107 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 SNORD116-20-201ENST00000384529 92 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 MIR490-201ENST00000384865 128 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 MIR625-201ENST00000385047 85 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX18Q96RF0 FTH1P15-201ENST00000406984 280 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RNU6-101P-201ENST00000410323 104 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 DPH3P2-201ENST00000422618 250 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AL591043.1-201ENST00000432461 424 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX18Q96RF0 AL714022.1-201ENST00000439897 151 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC079354.2-201ENST00000453523 154 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC112492.4-201ENST00000456549 352 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RPL21P10-201ENST00000463521 490 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RNU6-475P-201ENST00000516073 104 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 MIR5701-3-201ENST00000578890 82 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 MIR5701-1-201ENST00000585138 82 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 MIR5701-2-201ENST00000615634 82 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC087588.2-201ENST00000617667 426 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC241585.2-209ENST00000638217 143 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 AC073346.2-201ENST00000624724 2058 ntBASIC3.03□□□□□ -1.92
SNX18Q96RF0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX18Q96RF0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNX18Q96RF0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
SNX18Q96RF0 U8.9-201ENST00000365667 134 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 RNU6-823P-201ENST00000391042 103 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 RNA5SP252-201ENST00000391131 119 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 SNORA26.7-201ENST00000391288 122 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX18Q96RF0 MTCYBP9-201ENST00000431021 303 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 U8.20-201ENST00000459445 131 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 MRPL42P6-201ENST00000486397 371 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX18Q96RF0 FCF1P8-201ENST00000510322 597 ntBASIC3.02□□□□□ -1.93
SNX18Q96RF0 RNU1-143P-201ENST00000516296 146 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms