Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPIP1Q96JH7 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
VCPIP1Q96JH7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VCPIP1Q96JH7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPIP1Q96JH7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 MTND5P7-201ENST00000413558 1798 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 FTLP6-201ENST00000355274 422 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.389-201ENST00000383924 113 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 RNU6-851P-201ENST00000384565 107 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 RNU6-140P-201ENST00000384566 108 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 MIR578-201ENST00000384828 96 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC114482.1-201ENST00000418010 247 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 DPH3P2-201ENST00000422618 250 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AL645568.3-201ENST00000433683 316 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AL731563.1-201ENST00000442202 214 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC139453.3-201ENST00000493276 369 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 RNU6-635P-201ENST00000516651 102 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AL161670.1-201ENST00000554348 137 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC113195.1-201ENST00000579952 141 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 RPL12P50-201ENST00000603116 116 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 ELOCP5-201ENST00000604924 333 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC004805.2-201ENST00000605382 482 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 RNU6-85P-201ENST00000605989 107 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AL138880.2-201ENST00000616214 239 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 AC005592.1-201ENST00000566527 1640 ntBASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
VCPIP1Q96JH7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.80-201ENST00000362996 102 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-702P-201ENST00000364982 107 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 SNORA9.2-201ENST00000365361 133 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-842P-201ENST00000384269 107 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.485-201ENST00000384395 102 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 MIR517A-201ENST00000385001 87 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 SNORD73A-201ENST00000386062 65 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.645-201ENST00000391229 102 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC243428.1-201ENST00000421099 264 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 HMGB1P9-201ENST00000429856 646 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RPS29P6-201ENST00000438196 145 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC068781.1-201ENST00000488231 618 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC018437.1-201ENST00000492214 406 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNU6-307P-201ENST00000516743 106 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RNA5SP165-201ENST00000517142 115 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC069113.1-201ENST00000517763 267 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AL031601.2-202ENST00000622650 282 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC090617.7-201ENST00000623952 126 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 AC091812.1-201ENST00000432235 1948 ntBASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VCPIP1Q96JH7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.153-201ENST00000363615 91 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 RNU6-450P-201ENST00000364654 107 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 Y_RNA.574-201ENST00000384766 95 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 RNA5SP38-201ENST00000410750 119 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AL360271.2-201ENST00000447710 161 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 RPS15AP34-201ENST00000487776 387 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC084851.1-201ENST00000529105 249 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC005899.2-201ENST00000584353 90 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 MIR548AC-201ENST00000585049 88 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 AC018889.1-201ENST00000605372 397 ntBASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VCPIP1Q96JH7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.92
VCPIP1Q96JH7 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms