Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC026782.1-201ENST00000512952 449 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 BNIP3P16-201ENST00000589779 534 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC019159.1-201ENST00000605094 187 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC009229.3-201ENST00000608056 282 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL590808.1-201ENST00000618696 141 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC024581.2-201ENST00000619986 252 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL160413.1-201ENST00000622780 310 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC090617.7-201ENST00000623952 126 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL669831.3-213ENST00000636676 183 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
TRIM43Q96BQ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC074117.2-201ENST00000417130 397 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC002075.2-201ENST00000425207 252 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 USP9YP30-201ENST00000430729 455 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AL133396.1-201ENST00000432048 687 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 RPL30P15-201ENST00000457129 321 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 SNORD5.1-201ENST00000458800 75 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC008571.1-201ENST00000467232 300 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 CPDP1-201ENST00000579660 283 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 MIR4769-201ENST00000584126 77 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AP000654.2-201ENST00000605633 586 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AL133255.1-201ENST00000606374 441 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 MIR3976-201ENST00000606807 139 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 RMST_8.1-201ENST00000610287 165 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 AC098657.3-201ENST00000620434 263 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.21□□□□□ -1.9
TRIM43Q96BQ3 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.813-201ENST00000364639 102 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 RNU6-843P-201ENST00000384454 104 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 SNORD116-29-201ENST00000384516 83 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 RPS27P29-201ENST00000463110 252 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 UBL5P3-201ENST00000475112 231 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 GZMAP1-201ENST00000503054 631 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AP005902.1-201ENST00000521358 186 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AC109446.1-201ENST00000566172 220 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AL627309.6-201ENST00000606857 840 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 MIR8076-201ENST00000611401 83 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TRIM43Q96BQ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 MIR30E-201ENST00000362104 92 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 RNU4-76P-201ENST00000364509 141 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 MTND3P9-201ENST00000429526 346 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 ARL5AP4-201ENST00000430731 512 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 MIR4425-201ENST00000580572 84 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AC011494.1-201ENST00000596454 237 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AL391813.1-201ENST00000603098 260 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 1253 ms