Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL359757.2-201ENST00000624309 274 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGB4Q8WW32 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 SNORD21-201ENST00000383953 95 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 RNU6-601P-201ENST00000384540 107 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AL513475.1-201ENST00000406602 315 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AP000275.1-201ENST00000411943 390 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC063976.3-201ENST00000426849 329 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 DAP3P1-201ENST00000441522 278 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC009296.1-201ENST00000443146 155 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 RNU1-143P-201ENST00000516296 146 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC093027.1-201ENST00000546698 429 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC010620.2-201ENST00000600135 313 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AC096772.1-201ENST00000609146 564 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 U1.23-201ENST00000610293 146 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 RNU1-68P-201ENST00000615382 146 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 U1.39-201ENST00000621562 146 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 MTND5P27-201ENST00000428871 1720 ntBASIC2.92□□□□□ -1.94
HMGB4Q8WW32 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB4Q8WW32 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 RNU6-227P-201ENST00000362865 103 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 RNU6-797P-201ENST00000363101 109 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 U3.6-201ENST00000363622 211 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 SNORA68.1-201ENST00000364537 132 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 U8.8-201ENST00000365399 135 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 Y_RNA.387-201ENST00000383918 102 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 RNU6-790P-201ENST00000384479 105 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MIR196B-201ENST00000384852 84 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MIR544A-201ENST00000384855 91 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MTND3P9-201ENST00000429526 346 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AL133396.1-201ENST00000432048 687 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AL031659.1-201ENST00000447075 539 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 SNORD5.1-201ENST00000458800 75 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC114801.2-201ENST00000503825 781 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC026782.1-201ENST00000512952 449 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC078795.3-201ENST00000602913 472 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC018889.1-201ENST00000605372 397 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC018462.2-201ENST00000605375 395 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MIR3976-201ENST00000606807 139 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 MIR8076-201ENST00000611401 83 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC098657.3-201ENST00000620434 263 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AL035425.3-201ENST00000564206 4996 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AL359854.1-201ENST00000614203 1594 ntBASIC2.91□□□□□ -1.94
HMGB4Q8WW32 AC096644.4-201ENST00000563417 2912 ntBASIC2.9□□□□□ -1.94
HMGB4Q8WW32 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.9□□□□□ -1.94
HMGB4Q8WW32 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 RNU4-82P-201ENST00000362443 140 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 RNU6-1010P-201ENST00000362757 107 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 SNORD32A-201ENST00000364805 84 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 RN7SKP284-201ENST00000411002 343 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 USP9YP30-201ENST00000430729 455 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 FTH1P25-201ENST00000447665 469 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC091179.1-201ENST00000461606 579 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 RPL36AP48-201ENST00000485521 314 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC079598.5-201ENST00000547460 117 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 MIR4795-201ENST00000584182 89 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 RPL23AP78-201ENST00000599928 470 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 MIR7515-201ENST00000637837 67 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 FAM35CP-201ENST00000554755 2470 ntBASIC2.9□□□□□ -1.95
HMGB4Q8WW32 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGB4Q8WW32 AC002543.1-201ENST00000299783 1954 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.61-201ENST00000362835 102 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 SNORD114-19-201ENST00000363072 75 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms