Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-1085P-201ENST00000363576 107 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 RNU6-715P-201ENST00000365204 103 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 RNU2-20P-201ENST00000410425 191 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AP000275.1-201ENST00000411943 390 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC016691.1-201ENST00000441321 413 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC073415.1-201ENST00000449240 153 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 GMFBP1-201ENST00000467831 427 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AP003034.1-201ENST00000534621 422 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 BNIP3P30-201ENST00000601184 574 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC068790.6-201ENST00000602558 258 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 MTND5P30-201ENST00000452896 1731 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 AL354685.2-201ENST00000448218 1447 ntBASIC2.51□□□□□ -2.01
NPHP3Q7Z494 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP3Q7Z494 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 Y_RNA.122-201ENST00000363331 96 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 SNORA38-201ENST00000363946 132 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 Y_RNA.554-201ENST00000384672 102 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 RNU2-29P-201ENST00000410423 189 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 Y_RNA.623-201ENST00000411128 95 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 MTND1P23-201ENST00000416931 372 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC016831.2-201ENST00000417179 352 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AL669831.1-202ENST00000428504 417 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 GTF2IP13-201ENST00000438487 386 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 snoU109.2-201ENST00000459316 135 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AL163973.1-201ENST00000484753 577 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC090255.1-201ENST00000495779 349 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 SNORA40.12-201ENST00000516329 111 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 HIF1AP1-201ENST00000553642 175 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 LINC00933-203ENST00000559812 219 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.5□□□□□ -2.01
NPHP3Q7Z494 AC009314.1-201ENST00000603871 304 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 U6.42-201ENST00000618440 107 ntBASIC2.5□□□□□ -2.01
NPHP3Q7Z494 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AL359854.1-201ENST00000614203 1594 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 MIR412-201ENST00000362142 91 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 Y_RNA.255-201ENST00000364581 97 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RNU6-384P-201ENST00000364900 104 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 SNORA69-201ENST00000383895 132 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RNU6-517P-201ENST00000384362 110 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 MIR518D-201ENST00000385014 87 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RNU4-46P-201ENST00000410818 138 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 PGBD4P6-201ENST00000421501 610 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RPL30P4-201ENST00000429309 333 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 SCARNA18-201ENST00000459004 134 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 RNU7-95P-201ENST00000459222 64 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 Y_RNA.693-201ENST00000516641 110 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 BNIP3P6-201ENST00000549284 499 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AL512360.1-201ENST00000555346 234 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC025165.5-201ENST00000602802 578 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AC093788.1-201ENST00000609356 927 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 AL449363.1-201ENST00000617815 186 ntBASIC2.49□□□□□ -2.01
NPHP3Q7Z494 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP3Q7Z494 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-1322P-201ENST00000364309 107 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 SNORD14B-201ENST00000364533 90 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-1303P-201ENST00000364841 107 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-1280P-201ENST00000365211 107 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-483P-201ENST00000384088 108 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-45P-201ENST00000384471 107 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-1127P-201ENST00000384580 107 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 SNORD70.1-201ENST00000391007 85 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms