Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL442163.3-201ENST00000554110 156 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.19□□□□□ -2.38
CCDC58Q4VC31 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CCDC58Q4VC31 AC126177.8-201ENST00000618339 1015 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 RNU6-969P-201ENST00000383900 105 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 RNU6-549P-201ENST00000384433 107 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 RNU6-1237P-201ENST00000384777 107 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 RNU6-1054P-201ENST00000411293 104 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AC123900.1-201ENST00000420390 96 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MTND4LP14-201ENST00000429447 288 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AL035398.1-201ENST00000430869 322 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AL606517.1-201ENST00000446914 387 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC58Q4VC31 ATP5EP1-201ENST00000510257 156 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AC067942.3-201ENST00000512025 362 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MTCYBP33-201ENST00000575007 1130 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MIR5000-201ENST00000577717 103 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MIR3976-201ENST00000606807 139 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MIR6788-201ENST00000618842 66 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 AC243829.3-201ENST00000622177 108 ntBASIC0.18□□□□□ -2.38
CCDC58Q4VC31 MIR340-201ENST00000362125 95 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 VTRNA1-3-201ENST00000365645 89 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 AL359634.1-202ENST00000404721 284 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 RNA5SP111-201ENST00000411386 101 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.17□□□□□ -2.38
CCDC58Q4VC31 MTND1P3-201ENST00000484956 952 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.17□□□□□ -2.38
CCDC58Q4VC31 BNIP3P8-201ENST00000597863 560 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 AC243773.3-201ENST00000613270 256 ntBASIC0.17□□□□□ -2.38
CCDC58Q4VC31 RNU6-1123P-201ENST00000362347 106 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 RNU6-166P-201ENST00000384371 107 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 MIR548J-201ENST00000408833 112 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 COX6CP10-201ENST00000416832 224 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 MTCO3P29-201ENST00000432119 779 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 LARP1BP3-201ENST00000437229 869 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 AC069257.2-201ENST00000441819 155 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 ATP5J2P3-201ENST00000451550 258 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 MTCYBP1-201ENST00000454315 1119 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 TPRKBP1-201ENST00000456243 481 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 HMGB1P30-201ENST00000492455 606 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 AC005741.1-201ENST00000511094 432 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 RNU6-237P-201ENST00000515985 71 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 RN7SKP12-201ENST00000516275 143 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 RNU6-143P-201ENST00000516942 93 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 APOOP3-201ENST00000536787 586 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.16□□□□□ -2.38
CCDC58Q4VC31 MIR6504-201ENST00000613520 61 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 MIR6513-201ENST00000621188 64 ntBASIC0.16□□□□□ -2.38
CCDC58Q4VC31 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AF228730.1-201ENST00000397972 663 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AL590556.1-201ENST00000423231 483 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AC245047.7-201ENST00000440265 293 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 MTND5P8-201ENST00000449817 1083 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AC113410.1-201ENST00000505029 247 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 BNIP3P6-201ENST00000549284 499 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 AC120349.2-201ENST00000625002 298 ntBASIC0.15□□□□□ -2.39
CCDC58Q4VC31 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
CCDC58Q4VC31 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
CCDC58Q4VC31 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.14□□□□□ -2.39
CCDC58Q4VC31 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 RNU6-707P-201ENST00000364647 95 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 RNU6-16P-201ENST00000384385 107 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC016831.2-201ENST00000417179 352 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC091163.3-201ENST00000518269 1144 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC58Q4VC31 CR383656.8-201ENST00000549046 145 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 MIR4709-201ENST00000577272 72 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC098483.2-201ENST00000603158 454 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AL358072.1-201ENST00000604156 575 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC58Q4VC31 AC010975.3-201ENST00000618727 978 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 MTND4P21-201ENST00000453886 1357 ntBASIC0.14□□□□□ -2.39
CCDC58Q4VC31 RNU6-862P-201ENST00000362804 105 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 Y_RNA.363-201ENST00000365529 113 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 ELOCP9-201ENST00000418624 239 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 AC013262.1-201ENST00000426710 252 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 RPF2P2-201ENST00000504693 896 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 MIR4711-201ENST00000578274 70 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 MIR151B-201ENST00000584249 96 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 AC090330.1-201ENST00000588646 764 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 AL359740.1-201ENST00000624340 592 ntBASIC0.13□□□□□ -2.39
CCDC58Q4VC31 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 SNORA80D-201ENST00000384488 135 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 RNA5SP390-201ENST00000410191 113 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 RNFT1P2-201ENST00000443064 757 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC233266.1-201ENST00000454518 96 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms