Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 COPS8P3-201ENST00000526024 482 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 AC044792.1-201ENST00000593294 196 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 Y_RNA.263-201ENST00000364659 114 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 RNU6-214P-201ENST00000384130 107 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 Z98742.3-201ENST00000418637 326 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 PGBD4P6-201ENST00000421501 610 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 SNAP23P1-201ENST00000433229 246 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 RPL21P93-201ENST00000480465 489 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 RPS27AP10-201ENST00000496103 208 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.18□□□□□ -2.06
HCFC1P51610 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.18□□□□□ -2.06
HCFC1P51610 CR383656.8-201ENST00000549046 145 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 AL442663.2-201ENST00000554385 511 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 DNAJC8P1-201ENST00000554535 372 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.18□□□□□ -2.06
HCFC1P51610 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.18□□□□□ -2.06
HCFC1P51610 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HCFC1P51610 AC087045.1-201ENST00000605856 382 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
HCFC1P51610 AC241585.2-209ENST00000638217 143 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 ADAM3A-203ENST00000461344 2157 ntBASIC2.18□□□□□ -2.06
HCFC1P51610 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HCFC1P51610 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HCFC1P51610 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 AC009487.2-201ENST00000420969 6821 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RPL9P7-201ENST00000330965 580 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-78P-201ENST00000362897 107 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-512P-201ENST00000364438 103 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 MIR301A-201ENST00000385261 86 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 RPS3AP52-201ENST00000435639 297 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AC139453.3-201ENST00000493276 369 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-1016P-201ENST00000516689 94 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-711P-201ENST00000517255 106 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AP000763.2-201ENST00000540641 163 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AL163153.1-201ENST00000554223 283 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AC103996.1-201ENST00000555468 102 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 HMGB1P14-201ENST00000557424 591 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RPS3AP23-202ENST00000574601 686 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.17□□□□□ -2.06
HCFC1P51610 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 AC123912.5-201ENST00000605470 343 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HCFC1P51610 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HCFC1P51610 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-799P-201ENST00000363567 107 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-884P-201ENST00000363889 107 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNU6-198P-201ENST00000384258 104 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 RNA5SP210-201ENST00000391034 120 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 CYCSP33-201ENST00000414485 327 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AL513477.1-202ENST00000417061 214 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.17□□□□□ -2.06
HCFC1P51610 AC124916.1-201ENST00000444020 547 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 RPL23AP45-201ENST00000476406 468 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 Y_RNA.687-201ENST00000516558 91 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AC022634.1-201ENST00000520765 532 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 AC010186.2-204ENST00000537668 439 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.17□□□□□ -2.06
HCFC1P51610 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.17□□□□□ -2.06
HCFC1P51610 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.17□□□□□ -2.06
HCFC1P51610 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HCFC1P51610 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HCFC1P51610 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
HCFC1P51610 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HCFC1P51610 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HCFC1P51610 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HCFC1P51610 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HCFC1P51610 RNU6-1035P-201ENST00000384477 107 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 RNA5SP252-201ENST00000391131 119 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL590004.2-201ENST00000404787 371 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 FTH1P15-201ENST00000406984 280 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.16□□□□□ -2.06
HCFC1P51610 SKA2P1-201ENST00000425592 390 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.16□□□□□ -2.06
HCFC1P51610 AC010099.1-201ENST00000455434 375 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.16□□□□□ -2.06
HCFC1P51610 AC092798.1-201ENST00000458542 409 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.16□□□□□ -2.06
HCFC1P51610 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 RNA5SP165-201ENST00000517142 115 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.16□□□□□ -2.06
HCFC1P51610 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.16□□□□□ -2.06
HCFC1P51610 AC008121.1-201ENST00000603244 268 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 ELOCP5-201ENST00000604924 333 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 RNU6-85P-201ENST00000605989 107 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL022345.1-201ENST00000607292 135 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 AL359198.2-201ENST00000611836 194 ntBASIC2.16□□□□□ -2.06
HCFC1P51610 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HCFC1P51610 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.15□□□□□ -2.06
HCFC1P51610 RNU6-1252P-201ENST00000363054 104 ntBASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms