Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL7P37-201ENST00000425095 738 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AL365400.1-201ENST00000431854 640 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.34□□□□□ -2.04
NEDD4P46934 AL121601.2-201ENST00000438019 707 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.34□□□□□ -2.04
NEDD4P46934 AC107626.1-201ENST00000471084 183 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 RPL21P99-201ENST00000480369 423 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MRPL42P6-201ENST00000486397 371 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 SNORA25.17-201ENST00000517184 124 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AC090115.3-201ENST00000553218 849 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR5583-1-201ENST00000580941 59 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 U6atac.1-201ENST00000616025 117 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AC103705.1-201ENST00000619013 241 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 Z69720.2-201ENST00000624755 279 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR3688-2-201ENST00000636963 87 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR3529-201ENST00000637713 78 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 HAUS6P2-201ENST00000433254 2404 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 AC138393.1-203ENST00000327086 343 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 Y_RNA.231-201ENST00000364358 102 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 RNU6-1303P-201ENST00000364841 107 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 RNU4-20P-201ENST00000365601 151 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 RNU6-877P-201ENST00000383868 107 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 SNORD115-47-201ENST00000391226 86 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 FTH1P15-201ENST00000406984 280 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 RNU6-373P-201ENST00000411247 98 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 POLHP1-201ENST00000411806 470 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 AL513477.1-202ENST00000417061 214 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD4P46934 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
NEDD4P46934 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD4P46934 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 Y_RNA.654-201ENST00000497848 106 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.33□□□□□ -2.04
NEDD4P46934 RNU6-237P-201ENST00000515985 71 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 RNU6-189P-201ENST00000516120 101 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 SNORA43.2-201ENST00000516652 128 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
NEDD4P46934 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.33□□□□□ -2.04
NEDD4P46934 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.33□□□□□ -2.04
NEDD4P46934 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.33□□□□□ -2.04
NEDD4P46934 AC009318.2-201ENST00000610917 651 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NEDD4P46934 AC138627.2-201ENST00000624202 601 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.33□□□□□ -2.04
NEDD4P46934 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 MTND5P30-201ENST00000452896 1731 ntBASIC2.33□□□□□ -2.04
NEDD4P46934 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.32□□□□□ -2.04
NEDD4P46934 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 RNU6-451P-201ENST00000362921 107 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 Y_RNA.89-201ENST00000363031 102 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 RNU6-266P-201ENST00000364225 107 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 RNU6-1180P-201ENST00000364935 107 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NEDD4P46934 RNA5SP219-201ENST00000390940 113 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AL513475.1-201ENST00000406602 315 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD4P46934 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD4P46934 BX276092.3-201ENST00000424182 230 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 SRIP2-201ENST00000428470 166 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 ERLEC1P1-201ENST00000433806 578 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD4P46934 SNORA14.1-201ENST00000516113 141 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 SCARNA17.1-201ENST00000516211 143 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 SCARNA17.2-201ENST00000516334 143 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC109479.2-201ENST00000517842 174 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.32□□□□□ -2.04
NEDD4P46934 AC023050.3-201ENST00000541142 333 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC008121.1-201ENST00000603244 268 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 RNU6-89P-201ENST00000606519 100 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 AC002044.1-201ENST00000606707 158 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 SCARNA17.4-201ENST00000614296 143 ntBASIC2.32□□□□□ -2.04
NEDD4P46934 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
NEDD4P46934 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.32□□□□□ -2.04
NEDD4P46934 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.32□□□□□ -2.04
NEDD4P46934 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 AC121333.1-201ENST00000567488 2709 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 MTND4P5-201ENST00000435821 1374 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 RNU6-858P-201ENST00000362436 107 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 RNU5E-7P-201ENST00000365290 117 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 RNU6-843P-201ENST00000384454 104 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 MIR1277-201ENST00000408536 78 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 RNA5SP118-201ENST00000410385 109 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 OR9R1P-201ENST00000412200 877 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD4P46934 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD4P46934 MICF-203ENST00000432679 129 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.31□□□□□ -2.04
NEDD4P46934 AC004383.1-201ENST00000438135 289 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms