Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MIR4452-201ENST00000583004 71 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 MIR151B-201ENST00000584249 96 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 BNIP3P8-201ENST00000597863 560 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 AC126177.8-201ENST00000618339 1015 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 RNU6-16P-201ENST00000384385 107 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 MTCO3P29-201ENST00000432119 779 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 MTCO3P18-201ENST00000440206 761 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN1P05114 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.17□□□□□ -2.38
HMGN1P05114 MTND5P8-201ENST00000449817 1083 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 AC048334.1-201ENST00000477975 159 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 MTCO3P7-201ENST00000510008 774 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
HMGN1P05114 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.17□□□□□ -2.38
HMGN1P05114 AC104229.1-201ENST00000561364 255 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 MIR4666A-201ENST00000580160 79 ntBASIC0.17□□□□□ -2.38
HMGN1P05114 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 RNU6-622P-201ENST00000384272 103 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN1P05114 AC007000.2-201ENST00000442564 487 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 ATP5J2P3-201ENST00000451550 258 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 RPL39P38-201ENST00000467018 153 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 AC005741.1-201ENST00000511094 432 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN1P05114 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.16□□□□□ -2.38
HMGN1P05114 MIR4781-201ENST00000585250 76 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 MIR3976-201ENST00000606807 139 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN1P05114 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 AL356094.1-201ENST00000624663 1212 ntBASIC0.16□□□□□ -2.38
HMGN1P05114 AC123900.1-201ENST00000420390 96 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 AC022493.2-201ENST00000506122 481 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 AC009646.1-201ENST00000510455 318 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 RN7SKP12-201ENST00000516275 143 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 APOOP3-201ENST00000536787 586 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 AL442163.3-201ENST00000554110 156 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 MIR4709-201ENST00000577272 72 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 AC012557.2-201ENST00000605919 418 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
HMGN1P05114 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.15□□□□□ -2.39
HMGN1P05114 RNU6-1123P-201ENST00000362347 106 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 RNU6-216P-201ENST00000363282 104 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 RNU6-1054P-201ENST00000411293 104 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 HMGB1P30-201ENST00000492455 606 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 AC105758.1-201ENST00000506038 399 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.14□□□□□ -2.39
HMGN1P05114 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.14□□□□□ -2.39
HMGN1P05114 AC138915.2-201ENST00000569776 97 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 MIR4711-201ENST00000578274 70 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 AL445264.1-201ENST00000621719 171 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 MTND4P21-201ENST00000453886 1357 ntBASIC0.14□□□□□ -2.39
HMGN1P05114 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
HMGN1P05114 RNU6-353P-201ENST00000364266 108 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 SNORA80D-201ENST00000384488 135 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.13□□□□□ -2.39
HMGN1P05114 AC013262.1-201ENST00000426710 252 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AL035398.1-201ENST00000430869 322 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN1P05114 AC113410.1-201ENST00000505029 247 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC024589.1-201ENST00000512207 263 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 SNORA31.3-201ENST00000516029 96 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.13□□□□□ -2.39
HMGN1P05114 AC090330.1-201ENST00000588646 764 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC098483.2-201ENST00000603158 454 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AP002906.1-201ENST00000603405 233 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 KATNBL1P5-201ENST00000605015 517 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC243773.3-201ENST00000613270 256 ntBASIC0.13□□□□□ -2.39
HMGN1P05114 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 RNU6-969P-201ENST00000383900 105 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 RNU6-549P-201ENST00000384433 107 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 ELOCP9-201ENST00000418624 239 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 VN1R42P-201ENST00000424651 344 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 LARP1BP3-201ENST00000437229 869 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AL606517.1-201ENST00000446914 387 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AC233266.1-201ENST00000454518 96 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
HMGN1P05114 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 BNIP3P6-201ENST00000549284 499 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 HMGN1P30-201ENST00000589286 268 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AC242852.1-201ENST00000612151 96 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 MIR8070-201ENST00000616510 88 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AC244015.1-201ENST00000622301 99 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 AC007792.1-201ENST00000623023 402 ntBASIC0.12□□□□□ -2.39
HMGN1P05114 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.12□□□□□ -2.39
HMGN1P05114 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
HMGN1P05114 RNU1-133P-201ENST00000364867 167 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 RNU1-119P-201ENST00000391122 165 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 SNORA40C-201ENST00000391285 128 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 AF228730.1-201ENST00000397972 663 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 MIR936-201ENST00000401264 98 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 MTND4LP14-201ENST00000429447 288 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 FABP5P4-201ENST00000437203 171 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 AC245047.7-201ENST00000440265 293 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 MTND1P30-201ENST00000441241 901 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 AL606662.1-201ENST00000445763 553 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms