Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
NPHP4O75161 AL391994.1-201ENST00000254724 282 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 RNU6-395P-201ENST00000365662 106 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 MIR193B-201ENST00000384907 83 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 MIR186-201ENST00000384988 86 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC117503.1-201ENST00000472241 394 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.5□□□□□ -2.17
NPHP4O75161 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.5□□□□□ -2.17
NPHP4O75161 AC112206.3-201ENST00000514578 389 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AP003181.2-201ENST00000528941 181 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
NPHP4O75161 MTND1P8-201ENST00000571424 950 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC005034.5-201ENST00000604219 466 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC021646.1-201ENST00000605469 484 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC096772.1-201ENST00000609146 564 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.5□□□□□ -2.17
NPHP4O75161 AL773524.1-201ENST00000614065 229 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 AC092140.2-201ENST00000618027 521 ntBASIC1.5□□□□□ -2.17
NPHP4O75161 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPHP4O75161 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPHP4O75161 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.5□□□□□ -2.17
NPHP4O75161 RNU4-42P-201ENST00000364738 142 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NPHP4O75161 RNU6-39P-201ENST00000384344 107 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 MIR10A-201ENST00000385043 110 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 MTCYBP36-201ENST00000404146 440 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 RPS27AP14-201ENST00000422868 454 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AC012308.1-201ENST00000451232 178 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 KATNBL1P6-201ENST00000453433 915 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.49□□□□□ -2.17
NPHP4O75161 AC006512.1-201ENST00000468816 291 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NPHP4O75161 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.49□□□□□ -2.17
NPHP4O75161 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.49□□□□□ -2.17
NPHP4O75161 RNA5SP337-201ENST00000517007 109 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.49□□□□□ -2.17
NPHP4O75161 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.49□□□□□ -2.17
NPHP4O75161 AC090888.2-201ENST00000559765 1144 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
NPHP4O75161 RNU1-62P-201ENST00000362599 164 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 SNORD56.2-201ENST00000363242 71 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 SNORD116-20-201ENST00000384529 92 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 MIR532-201ENST00000385025 91 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 CISD1P1-201ENST00000393907 327 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 RNU2-48P-201ENST00000410694 191 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AC006366.1-201ENST00000422002 759 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AL354941.1-201ENST00000438600 464 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.49□□□□□ -2.17
NPHP4O75161 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 MTATP6P9-201ENST00000515039 680 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AP003392.2-201ENST00000527269 208 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AC243960.4-201ENST00000600532 288 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 AC098614.4-201ENST00000607601 462 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 Z82243.1-201ENST00000609432 473 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 uc_338.15-201ENST00000615470 191 ntBASIC1.49□□□□□ -2.17
NPHP4O75161 RNU6-533P-201ENST00000384144 107 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-72P-201ENST00000384285 79 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-843P-201ENST00000384454 104 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-1274P-201ENST00000384557 107 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 MIR1262-201ENST00000408276 93 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.48□□□□□ -2.17
NPHP4O75161 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.48□□□□□ -2.17
NPHP4O75161 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.48□□□□□ -2.17
NPHP4O75161 AC092989.1-201ENST00000481235 277 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AP001025.1-201ENST00000486139 332 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 HMGB1P30-201ENST00000492455 606 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC091965.2-201ENST00000512324 613 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-123P-201ENST00000516163 102 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU7-51P-201ENST00000516560 62 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-965P-201ENST00000516721 96 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.48□□□□□ -2.17
NPHP4O75161 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.48□□□□□ -2.17
NPHP4O75161 OR5AL2P-201ENST00000532185 920 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.48□□□□□ -2.17
NPHP4O75161 TMF1P1-201ENST00000576058 373 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC026271.5-201ENST00000577873 130 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 MIR4714-201ENST00000580728 77 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.48□□□□□ -2.17
NPHP4O75161 AC174048.1-201ENST00000603389 144 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AP000811.1-201ENST00000603803 651 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AL022154.1-201ENST00000604698 785 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.48□□□□□ -2.17
NPHP4O75161 AP002360.4-201ENST00000606980 481 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC104010.1-201ENST00000616889 150 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 AC007671.2-201ENST00000637344 619 ntBASIC1.48□□□□□ -2.17
NPHP4O75161 RNU6-944P-201ENST00000364023 107 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 Y_RNA.251-201ENST00000364551 99 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 RNU6-1179P-201ENST00000384667 107 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 MIR578-201ENST00000384828 96 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.47□□□□□ -2.17
NPHP4O75161 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.47□□□□□ -2.17
NPHP4O75161 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.47□□□□□ -2.17
NPHP4O75161 AC003071.1-201ENST00000451219 789 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.47□□□□□ -2.17
NPHP4O75161 AP000797.1-201ENST00000478870 387 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.47□□□□□ -2.17
NPHP4O75161 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.47□□□□□ -2.17
NPHP4O75161 Y_RNA.687-201ENST00000516558 91 ntBASIC1.47□□□□□ -2.17
NPHP4O75161 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms