Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RNU6-296P-201ENST00000384608 107 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RNU6-482P-201ENST00000391068 107 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.11□□□□□ -2.23
SGCEO43556 AC123900.1-201ENST00000420390 96 ntBASIC1.11□□□□□ -2.23
SGCEO43556 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AL135790.2-201ENST00000437701 267 ntBASIC1.11□□□□□ -2.23
SGCEO43556 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.11□□□□□ -2.23
SGCEO43556 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.11□□□□□ -2.23
SGCEO43556 RNU7-95P-201ENST00000459222 64 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RPL9P9-202ENST00000466501 579 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AC022447.4-201ENST00000504053 364 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.11□□□□□ -2.23
SGCEO43556 AC116347.2-201ENST00000514912 523 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RNU6-123P-201ENST00000516163 102 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
SGCEO43556 RPL21P5-201ENST00000554662 472 ntBASIC1.11□□□□□ -2.23
SGCEO43556 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.11□□□□□ -2.23
SGCEO43556 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
SGCEO43556 MIR5697-201ENST00000578045 78 ntBASIC1.11□□□□□ -2.23
SGCEO43556 MIR5692A1-201ENST00000580523 69 ntBASIC1.11□□□□□ -2.23
SGCEO43556 BNIP3P40-201ENST00000596017 556 ntBASIC1.11□□□□□ -2.23
SGCEO43556 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.11□□□□□ -2.23
SGCEO43556 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SGCEO43556 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SGCEO43556 MIR302D-201ENST00000362275 68 ntBASIC1.1□□□□□ -2.23
SGCEO43556 RNU6-78P-201ENST00000362897 107 ntBASIC1.1□□□□□ -2.23
SGCEO43556 RNU6-527P-201ENST00000363425 104 ntBASIC1.1□□□□□ -2.23
SGCEO43556 SNORA7.1-201ENST00000363750 139 ntBASIC1.1□□□□□ -2.23
SGCEO43556 SNORD32B-201ENST00000364460 84 ntBASIC1.1□□□□□ -2.23
SGCEO43556 RNU6-26P-201ENST00000383985 107 ntBASIC1.1□□□□□ -2.23
SGCEO43556 RNU6-636P-201ENST00000384598 107 ntBASIC1.1□□□□□ -2.23
SGCEO43556 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
SGCEO43556 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
SGCEO43556 MTCO2P21-201ENST00000419780 677 ntBASIC1.1□□□□□ -2.23
SGCEO43556 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
SGCEO43556 AL669831.1-202ENST00000428504 417 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
SGCEO43556 KATNBL1P3-201ENST00000443475 909 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC134050.1-201ENST00000495088 933 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC097473.1-201ENST00000508142 408 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC108078.2-201ENST00000510750 236 ntBASIC1.1□□□□□ -2.23
SGCEO43556 SNORA3.4-201ENST00000515969 96 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.1□□□□□ -2.23
SGCEO43556 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.1□□□□□ -2.23
SGCEO43556 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.1□□□□□ -2.23
SGCEO43556 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
SGCEO43556 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC018645.2-201ENST00000609151 472 ntBASIC1.1□□□□□ -2.23
SGCEO43556 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.1□□□□□ -2.23
SGCEO43556 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.1□□□□□ -2.23
SGCEO43556 AC022513.1-201ENST00000624512 117 ntBASIC1.1□□□□□ -2.23
SGCEO43556 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
SGCEO43556 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SGCEO43556 Y_RNA.140-201ENST00000363474 103 ntBASIC1.09□□□□□ -2.23
SGCEO43556 Y_RNA.302-201ENST00000364997 102 ntBASIC1.09□□□□□ -2.23
SGCEO43556 RNU5E-7P-201ENST00000365290 117 ntBASIC1.09□□□□□ -2.23
SGCEO43556 MIR544A-201ENST00000384855 91 ntBASIC1.09□□□□□ -2.23
SGCEO43556 MIR520A-201ENST00000384862 85 ntBASIC1.09□□□□□ -2.23
SGCEO43556 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.09□□□□□ -2.23
SGCEO43556 RPS27P16-201ENST00000425758 201 ntBASIC1.09□□□□□ -2.23
SGCEO43556 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
SGCEO43556 C8orf59P1-201ENST00000429930 303 ntBASIC1.09□□□□□ -2.23
SGCEO43556 RPL37P21-201ENST00000435890 276 ntBASIC1.09□□□□□ -2.23
SGCEO43556 RPS27AP8-201ENST00000452665 445 ntBASIC1.09□□□□□ -2.23
SGCEO43556 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.09□□□□□ -2.23
SGCEO43556 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.09□□□□□ -2.23
SGCEO43556 RNA5SP269-201ENST00000459032 137 ntBASIC1.09□□□□□ -2.23
SGCEO43556 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.23
SGCEO43556 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.09□□□□□ -2.23
SGCEO43556 HMGB1P33-201ENST00000563485 527 ntBASIC1.09□□□□□ -2.23
SGCEO43556 AC012414.6-201ENST00000568241 401 ntBASIC1.09□□□□□ -2.23
SGCEO43556 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.09□□□□□ -2.23
SGCEO43556 AP001004.1-201ENST00000582468 324 ntBASIC1.09□□□□□ -2.23
SGCEO43556 AC013244.3-201ENST00000605614 388 ntBASIC1.09□□□□□ -2.23
SGCEO43556 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.09□□□□□ -2.23
SGCEO43556 AL078604.3-201ENST00000615580 211 ntBASIC1.09□□□□□ -2.23
SGCEO43556 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.09□□□□□ -2.23
SGCEO43556 AC068205.3-201ENST00000636385 468 ntBASIC1.09□□□□□ -2.23
SGCEO43556 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.24
SGCEO43556 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
SGCEO43556 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SGCEO43556 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
SGCEO43556 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
SGCEO43556 RNU6-1245P-201ENST00000411130 106 ntBASIC1.08□□□□□ -2.24
SGCEO43556 AL031779.1-201ENST00000415663 330 ntBASIC1.08□□□□□ -2.24
SGCEO43556 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.08□□□□□ -2.24
SGCEO43556 HSPE1P9-201ENST00000440046 311 ntBASIC1.08□□□□□ -2.24
SGCEO43556 GDI2P2-201ENST00000445131 608 ntBASIC1.08□□□□□ -2.24
SGCEO43556 AL360271.2-201ENST00000447710 161 ntBASIC1.08□□□□□ -2.24
SGCEO43556 MTND3P5-201ENST00000512798 333 ntBASIC1.08□□□□□ -2.24
SGCEO43556 MIR449C-201ENST00000516047 92 ntBASIC1.08□□□□□ -2.24
SGCEO43556 SNORD60.2-201ENST00000516883 86 ntBASIC1.08□□□□□ -2.24
SGCEO43556 RNA5SP337-201ENST00000517007 109 ntBASIC1.08□□□□□ -2.24
SGCEO43556 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SGCEO43556 AP002782.1-201ENST00000623107 614 ntBASIC1.08□□□□□ -2.24
SGCEO43556 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms