Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM38O00635 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRIM38O00635 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM38O00635 Y_RNA.489-201ENST00000384410 101 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 RNU6-750P-201ENST00000390946 107 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 RNA5SP354-201ENST00000391247 136 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 SNORA75.6-201ENST00000391318 127 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 EIF4E2P1-201ENST00000393781 255 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 U3.37-201ENST00000408528 213 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 S100A11P2-201ENST00000467589 312 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 AC113155.1-201ENST00000511141 769 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 Y_RNA.670-201ENST00000516255 105 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 RNU6-1016P-201ENST00000516689 94 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AC069113.1-201ENST00000517763 267 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM38O00635 AC009229.3-201ENST00000608056 282 ntBASIC3.28□□□□□ -1.88
TRIM38O00635 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM38O00635 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM38O00635 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 AC005592.1-201ENST00000566527 1640 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
TRIM38O00635 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
TRIM38O00635 AL157777.2-201ENST00000258070 137 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 RNU6-266P-201ENST00000364225 107 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM38O00635 Y_RNA.389-201ENST00000383924 113 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 RNU6-72P-201ENST00000384285 79 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 RNU6-472P-201ENST00000384299 107 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 Y_RNA.485-201ENST00000384395 102 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRIM38O00635 RPS4XP7-201ENST00000406274 780 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM38O00635 AC006026.2-201ENST00000457376 180 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 RPS27P26-201ENST00000494583 239 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 RNU6-408P-201ENST00000515910 100 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 AP004607.1-201ENST00000524456 203 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 EIF4BP1-201ENST00000554881 351 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM38O00635 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM38O00635 AL162274.2-201ENST00000614406 332 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 AC137590.2-201ENST00000619709 240 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM38O00635 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM38O00635 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM38O00635 AC091812.1-201ENST00000432235 1948 ntBASIC3.27□□□□□ -1.89
TRIM38O00635 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM38O00635 RNU6-593P-201ENST00000364716 112 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 Y_RNA.324-201ENST00000365165 102 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNU6-898P-201ENST00000365627 104 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNA5SP219-201ENST00000390940 113 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNU6-823P-201ENST00000391042 103 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 U3.26-201ENST00000391236 204 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 SAR1AP2-201ENST00000392696 594 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM38O00635 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM38O00635 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM38O00635 RPL21P2-201ENST00000440049 481 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC116655.1-201ENST00000508324 901 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM38O00635 RNU6-470P-201ENST00000515954 104 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNA5SP341-201ENST00000516261 117 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC023157.2-201ENST00000540596 141 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC007375.1-201ENST00000554513 578 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM38O00635 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM38O00635 AC018462.2-201ENST00000605375 395 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 MIR6128-201ENST00000615528 109 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 AC010378.1-201ENST00000619270 362 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
TRIM38O00635 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM38O00635 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM38O00635 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM38O00635 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM38O00635 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM38O00635 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRIM38O00635 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM38O00635 RNU6-874P-201ENST00000362390 105 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 RNU6-1303P-201ENST00000364841 107 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 Y_RNA.552-201ENST00000384665 112 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 MIR450B-201ENST00000401182 78 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 Y_RNA.594-201ENST00000410373 140 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 RNU2-49P-201ENST00000410666 184 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 Z99755.1-201ENST00000414048 380 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 AL590632.1-201ENST00000424289 371 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM38O00635 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms