Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC019159.1-201ENST00000605094 187 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC097372.5-201ENST00000623665 376 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 SNORD50.1-201ENST00000362987 71 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RNU1-105P-201ENST00000363470 161 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.252-201ENST00000364556 101 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-692P-201ENST00000384496 107 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 BTF3L4P2-201ENST00000392798 346 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RNA5SP390-201ENST00000410191 113 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RPL23AP50-201ENST00000434149 455 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 MIR2053-201ENST00000459295 91 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AP001025.1-201ENST00000486139 332 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC068781.1-201ENST00000488231 618 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC022447.4-201ENST00000504053 364 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC022493.2-201ENST00000506122 481 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 SCARNA15.1-201ENST00000516384 125 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AL391813.1-201ENST00000603098 260 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-91P-201ENST00000607774 107 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA3Q9Y5H8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.202-201ENST00000364083 110 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC096664.2-201ENST00000411843 406 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 PMCHL1-202ENST00000423102 261 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC012308.1-201ENST00000451232 178 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 FO393415.2-201ENST00000480085 343 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AL163540.1-201ENST00000485382 386 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 RPL17P19-201ENST00000489069 552 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AP000889.1-201ENST00000530968 660 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 CBX3P8-201ENST00000532412 525 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC010653.1-201ENST00000571108 881 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
PCDHA3Q9Y5H8 MTND5P9-201ENST00000503854 1755 ntBASIC3.28□□□□□ -1.89
PCDHA3Q9Y5H8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.28-201ENST00000362554 111 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-622P-201ENST00000384272 103 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AL035666.1-201ENST00000446195 348 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AL031659.1-201ENST00000447075 539 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AC079354.2-201ENST00000453523 154 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 RN7SKP43-201ENST00000516173 320 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AC005014.2-201ENST00000607795 599 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AC009318.2-201ENST00000610917 651 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 AC091925.1-201ENST00000623204 462 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 ZNF299P-201ENST00000406845 1804 ntBASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA3Q9Y5H8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.31-201ENST00000362574 102 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.132-201ENST00000363421 102 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-799P-201ENST00000363567 107 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-595P-201ENST00000363944 107 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 SNORA70.4-201ENST00000365509 134 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.533-201ENST00000384596 114 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 MIR183-201ENST00000384958 110 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 MIR34B-201ENST00000385076 84 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 NUP35P1-201ENST00000422734 947 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RPL23AP95-201ENST00000426806 265 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL441985.1-201ENST00000457727 251 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 snoU13.22-201ENST00000459428 104 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms