Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 USP9YP8-201ENST00000441913 500 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 HMGN2P10-201ENST00000448085 265 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 MTND3P10-201ENST00000450967 341 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RNA5SP341-201ENST00000516261 117 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC104576.1-201ENST00000524225 88 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC005261.5-201ENST00000596280 355 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL355073.2-201ENST00000612106 557 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NDE1Q9NXR1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.34□□□□□ -2.04
NDE1Q9NXR1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.70-201ENST00000362886 110 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 PDCL2P1-201ENST00000419302 352 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 IFNA20P-201ENST00000436840 528 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AL031274.1-201ENST00000450334 232 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC090096.1-201ENST00000489168 390 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 TRBVA-201ENST00000498804 316 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC091951.2-201ENST00000500762 203 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC022634.1-201ENST00000520765 532 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AP005597.4-201ENST00000526762 229 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 CYCSP27-201ENST00000527643 293 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC025281.1-201ENST00000567026 265 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 MIR3672-201ENST00000584290 82 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC008121.1-201ENST00000603244 268 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AL670379.10-201ENST00000604330 253 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AL670379.9-201ENST00000605428 253 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 AC009994.1-201ENST00000606889 253 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 MIR6134-201ENST00000617606 109 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.33□□□□□ -2.04
NDE1Q9NXR1 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
NDE1Q9NXR1 RNU6-845P-201ENST00000362578 103 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 SNORD113-7-201ENST00000363762 77 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.184-201ENST00000363884 108 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU6-867P-201ENST00000364956 107 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 VN1R36P-201ENST00000414936 291 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AL365496.1-201ENST00000426885 215 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 MTCO2P3-201ENST00000442543 421 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 MTND5P20-201ENST00000448677 143 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU7-138P-201ENST00000459479 64 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU6-329P-201ENST00000459618 107 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AC114781.4-201ENST00000513707 639 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU6-864P-201ENST00000516256 108 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU6-256P-201ENST00000516747 97 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU7-30P-201ENST00000516835 62 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.702-201ENST00000516843 96 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RNU6-1088P-201ENST00000516850 104 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 RN7SKP256-201ENST00000517201 314 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 EIF4BP1-201ENST00000554881 351 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AC005498.1-201ENST00000592125 465 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 AC087045.1-201ENST00000605856 382 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 Z69720.2-201ENST00000624755 279 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
NDE1Q9NXR1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.32□□□□□ -2.04
NDE1Q9NXR1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms