Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CDT1Q9H211 uc_338.22-201ENST00000622722 187 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDT1Q9H211 AC091564.4-201ENST00000533934 2194 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 Y_RNA.395-201ENST00000383945 109 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNU6-310P-201ENST00000384655 107 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 MIR606-201ENST00000384851 96 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 MIR9-1-201ENST00000385198 89 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNU2-52P-201ENST00000410680 190 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RPL26P27-201ENST00000414397 437 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.97□□□□□ -1.93
CDT1Q9H211 NUP35P1-201ENST00000422734 947 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AL714022.1-201ENST00000439897 151 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RPL30P15-201ENST00000457129 321 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RPL26P9-201ENST00000457466 433 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AL163540.1-201ENST00000485382 386 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AC092436.3-201ENST00000511788 257 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNU6-1170P-201ENST00000515974 106 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNU6-120P-201ENST00000516077 103 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 Y_RNA.711-201ENST00000516993 102 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 RNU6-323P-201ENST00000521915 107 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 IMMP1LP2-201ENST00000552954 492 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.97□□□□□ -1.93
CDT1Q9H211 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.97□□□□□ -1.93
CDT1Q9H211 HMGN2P15-201ENST00000585707 270 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.97□□□□□ -1.93
CDT1Q9H211 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 AC005046.1-201ENST00000608515 625 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDT1Q9H211 AC138627.2-201ENST00000624202 601 ntBASIC2.97□□□□□ -1.93
CDT1Q9H211 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDT1Q9H211 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CDT1Q9H211 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDT1Q9H211 RNU6-562P-201ENST00000362731 107 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 Y_RNA.187-201ENST00000363918 113 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 Y_RNA.197-201ENST00000364004 102 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 SNORA22B-201ENST00000383876 138 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 Y_RNA.404-201ENST00000383978 102 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 RNU6-198P-201ENST00000384258 104 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 RNU6-738P-201ENST00000384531 106 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 RNU6-95P-201ENST00000384697 107 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.96□□□□□ -1.94
CDT1Q9H211 AL356057.3-201ENST00000402607 340 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
CDT1Q9H211 RNA5SP184-201ENST00000411071 108 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 RPL7P10-201ENST00000417407 739 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 HMGB1P9-201ENST00000429856 646 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.96□□□□□ -1.94
CDT1Q9H211 AL109933.2-201ENST00000452651 260 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.96□□□□□ -1.94
CDT1Q9H211 snoU109.2-201ENST00000459316 135 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 Y_RNA.631-201ENST00000459607 101 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.96□□□□□ -1.94
CDT1Q9H211 RNU6-1137P-201ENST00000517073 99 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.96□□□□□ -1.94
CDT1Q9H211 MIR4672-201ENST00000583126 81 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 MIR3605-201ENST00000583214 100 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AL645944.1-201ENST00000603857 493 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 AP001836.1-201ENST00000604675 523 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 MIR6128-201ENST00000615528 109 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 MTND5P7-201ENST00000413558 1798 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 MTND4P27-201ENST00000450813 1354 ntBASIC2.96□□□□□ -1.94
CDT1Q9H211 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.96□□□□□ -1.94
CDT1Q9H211 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
CDT1Q9H211 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDT1Q9H211 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDT1Q9H211 Y_RNA.482-201ENST00000384377 111 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 NDUFS5P4-201ENST00000412983 318 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AL137792.2-201ENST00000443484 235 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 MTND4P19-201ENST00000446659 478 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 ELOCP24-201ENST00000456370 334 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 RPS26P21-201ENST00000475397 348 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.95□□□□□ -1.94
CDT1Q9H211 AC026782.1-201ENST00000512952 449 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 Y_RNA.670-201ENST00000516255 105 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AC025423.5-201ENST00000550230 219 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 RNU6-85P-201ENST00000605989 107 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AC019193.3-201ENST00000609144 554 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AL161629.2-201ENST00000615347 275 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 AC098657.3-201ENST00000620434 263 ntBASIC2.95□□□□□ -1.94
CDT1Q9H211 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
CDT1Q9H211 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.95□□□□□ -1.94
CDT1Q9H211 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
CDT1Q9H211 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
CDT1Q9H211 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDT1Q9H211 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC010680.1-201ENST00000590024 3590 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDT1Q9H211 Y_RNA.5-201ENST00000362334 102 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 RNU6-859P-201ENST00000362728 107 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 Y_RNA.146-201ENST00000363549 102 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 RNU6-1059P-201ENST00000363752 98 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 SNORA33.2-201ENST00000365413 134 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 RNU6-898P-201ENST00000365627 104 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDT1Q9H211 RNU6-601P-201ENST00000384540 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms