Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 RNVU1-2-201ENST00000516326 135 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC112693.2-201ENST00000556538 232 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC104408.1-201ENST00000605241 170 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC084824.4-201ENST00000620106 731 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC027104.1-201ENST00000563702 681 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AC016925.1-201ENST00000458303 298 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AC112187.2-201ENST00000604345 283 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AC069294.1-201ENST00000608397 350 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 MIR6864-201ENST00000617935 70 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 MIR520F-201ENST00000384824 87 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 HAUS1P3-201ENST00000523909 662 ntBASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD1Q96PZ7 RNY4P28-201ENST00000365281 93 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 MIR496-201ENST00000385226 102 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC092447.9-201ENST00000603395 144 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 RNU6-793P-201ENST00000384233 104 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 RNA5SP501-201ENST00000410990 112 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 RPS15AP9-201ENST00000439856 381 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC026271.5-201ENST00000577873 130 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC016909.1-201ENST00000415916 166 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 SCARNA3-201ENST00000517097 143 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AP002453.2-201ENST00000533503 320 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.34□□□□□ -2.46
CSMD1Q96PZ7 RNU4-23P-201ENST00000362839 140 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 RNU6-439P-201ENST00000384188 106 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AC091860.1-201ENST00000505723 432 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AC010587.2-201ENST00000511727 448 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 RNU6-863P-201ENST00000515989 104 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 MIR5094-201ENST00000578766 85 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 AC068647.2-201ENST00000637380 353 ntBASIC-0.35□□□□□ -2.46
CSMD1Q96PZ7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 RNA5SP192-201ENST00000364404 120 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 MIR140-201ENST00000385282 100 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC107954.1-201ENST00000565906 727 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC092268.1-201ENST00000342691 405 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC007435.1-201ENST00000421086 415 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC025423.5-201ENST00000550230 219 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AC005261.5-201ENST00000596280 355 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 MIR8076-201ENST00000611401 83 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AL390237.1-201ENST00000404226 1415 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 AL049641.1-201ENST00000441055 1948 ntBASIC-0.35□□□□□ -2.47
CSMD1Q96PZ7 SNORD71-201ENST00000411292 86 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 MTCO1P20-201ENST00000425366 358 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 RNU7-90P-201ENST00000459216 62 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 AL360219.1-201ENST00000610230 366 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 AC093648.1-201ENST00000623546 606 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
CSMD1Q96PZ7 RNU5E-1-201ENST00000362477 120 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms