Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 BUD31P2-201ENST00000449374 300 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.44□□□□□ -2.48
CFAP54Q96N23 SNORD54-201ENST00000459159 67 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 RNU6-863P-201ENST00000515989 104 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 LRRC34P1-201ENST00000542742 915 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 MIR4765-201ENST00000585007 77 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AL360181.4-201ENST00000621752 134 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AL157786.1-207ENST00000627771 695 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.44□□□□□ -2.48
CFAP54Q96N23 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.44□□□□□ -2.48
CFAP54Q96N23 RNU6-858P-201ENST00000362436 107 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 MIR520F-201ENST00000384824 87 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 MIR29C-201ENST00000385231 88 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AL355796.1-201ENST00000406706 323 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AC244098.3-201ENST00000424803 96 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 MTCO3P2-201ENST00000457365 171 ntBASIC-0.44□□□□□ -2.48
CFAP54Q96N23 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.44□□□□□ -2.48
CFAP54Q96N23 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CFAP54Q96N23 MIR610-201ENST00000385139 96 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AP003392.2-201ENST00000527269 208 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC040926.1-201ENST00000530195 238 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC040168.1-201ENST00000623594 991 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC091965.5-201ENST00000624785 342 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC016925.1-201ENST00000458303 298 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.45□□□□□ -2.48
CFAP54Q96N23 AC064807.4-201ENST00000607201 407 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
CFAP54Q96N23 SNORA18.1-201ENST00000363418 128 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 RNU6-756P-201ENST00000383997 107 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC091860.1-201ENST00000505723 432 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC112220.3-201ENST00000605502 502 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC084824.4-201ENST00000620106 731 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC107954.1-201ENST00000565906 727 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 RPL23AP91-201ENST00000569211 455 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC026271.5-201ENST00000577873 130 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 MIR8076-201ENST00000611401 83 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC139769.3-201ENST00000618383 175 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 MIR145-201ENST00000384967 88 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC007742.1-201ENST00000425789 329 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 C1DP1-201ENST00000426049 402 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.46□□□□□ -2.48
CFAP54Q96N23 ELOCP26-201ENST00000436067 329 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 SNORA31.6-201ENST00000516241 130 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
CFAP54Q96N23 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 MIR496-201ENST00000385226 102 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 MIR325-201ENST00000385260 98 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AF228730.1-201ENST00000397972 663 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AC092809.3-201ENST00000415453 231 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AC004865.1-201ENST00000442276 1003 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AL606662.1-201ENST00000445763 553 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.47□□□□□ -2.48
CFAP54Q96N23 AC022432.1-201ENST00000595739 310 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.47□□□□□ -2.48
CFAP54Q96N23 RNY4P36-201ENST00000391116 96 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AC007435.1-201ENST00000421086 415 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.47□□□□□ -2.49
CFAP54Q96N23 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.47□□□□□ -2.49
CFAP54Q96N23 RNA5SP503-201ENST00000517047 117 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AC023157.2-201ENST00000540596 141 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AL121579.1-201ENST00000555129 305 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 NAMPTP3-201ENST00000569273 224 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AL360219.1-201ENST00000610230 366 ntBASIC-0.47□□□□□ -2.49
CFAP54Q96N23 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 RPF2P2-201ENST00000504693 896 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC027309.3-201ENST00000623419 351 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 RNU4-16P-201ENST00000364737 141 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 RNY3P14-201ENST00000384309 102 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 RNU6-339P-201ENST00000384310 107 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.48□□□□□ -2.49
CFAP54Q96N23 SCARNA3-201ENST00000517097 143 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC069113.3-201ENST00000521019 150 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 AC024405.2-202ENST00000532731 184 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 BNIP3P31-201ENST00000604515 566 ntBASIC-0.48□□□□□ -2.49
CFAP54Q96N23 7SK.10-201ENST00000621414 298 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms