Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC005951.2-201ENST00000576282 495 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL161798.1-201ENST00000604630 131 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL139344.1-201ENST00000605228 195 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 Pinc.1-201ENST00000616452 154 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC006927.2-201ENST00000639256 389 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTND5P33-201ENST00000571250 1450 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MIR412-201ENST00000362142 91 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-529P-201ENST00000363383 104 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTND3P20-201ENST00000407663 186 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RPL37P10-201ENST00000412884 288 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTCO3P15-201ENST00000526563 574 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MIR4789-201ENST00000577469 82 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AP000943.4-201ENST00000622912 357 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 ELL2P3-201ENST00000457883 1602 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU1-36P-201ENST00000365130 165 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL353621.1-201ENST00000418219 243 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTND1P32-201ENST00000433043 938 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTCO2P20-201ENST00000437339 673 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 BTF3L4P3-201ENST00000418879 476 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTND5P14-201ENST00000441481 1267 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RPL9P9-202ENST00000466501 579 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 OR2A41P-201ENST00000473586 105 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC107953.1-201ENST00000522216 297 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC091489.2-201ENST00000566263 604 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC104072.1-201ENST00000568817 668 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC108676.2-201ENST00000605225 163 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC068787.1-201ENST00000623908 691 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNA5SP347-201ENST00000362445 119 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-942P-201ENST00000363002 107 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.311-201ENST00000365068 96 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU2-36P-201ENST00000410361 191 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU2-23P-201ENST00000410545 195 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 PTGES3P1-201ENST00000439531 483 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC012308.1-201ENST00000451232 178 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC067863.3-201ENST00000624172 122 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-944P-201ENST00000364023 107 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-278P-201ENST00000390945 109 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC009518.2-201ENST00000418056 731 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC090615.1-201ENST00000577519 154 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC112220.2-201ENST00000605513 533 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC013470.4-201ENST00000619978 986 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC084824.4-201ENST00000620106 731 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC120349.2-201ENST00000625002 298 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC092192.1-201ENST00000633154 1018 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 PCMTD1P7-201ENST00000634506 357 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC023934.1-201ENST00000574529 2389 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC092268.1-201ENST00000342691 405 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 SNORD114-15-201ENST00000364687 72 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MIR100-201ENST00000385259 80 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 PGBD4P5-201ENST00000445958 426 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 ELOCP30-201ENST00000447108 299 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 CECR9-201ENST00000453421 199 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-667P-201ENST00000517186 102 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL450270.1-201ENST00000606160 391 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AL353149.1-201ENST00000610667 244 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 AC092447.10-201ENST00000620607 1652 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPL23AP32-201ENST00000395315 459 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL357139.1-201ENST00000407792 426 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AP000542.1-201ENST00000448473 371 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MEMO1P3-201ENST00000459811 302 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MTCO2P29-201ENST00000465212 189 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 HMGN1P13-201ENST00000505795 138 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC093259.1-201ENST00000509755 300 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNA5SP137-201ENST00000516833 135 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC009902.1-201ENST00000519351 183 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AP006587.4-201ENST00000526053 529 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC079598.5-201ENST00000547460 117 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL590084.2-201ENST00000401481 382 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL359634.1-202ENST00000404721 284 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPL36AP53-201ENST00000432891 316 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-953P-201ENST00000459154 107 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 snoU13.14-201ENST00000459372 104 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-567P-201ENST00000516746 107 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 ROCK1P1-201ENST00000573767 549 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC008751.2-201ENST00000597885 980 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 FRG1KP-201ENST00000623592 341 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms