Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-160P-201ENST00000384591 107 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.02□□□□□ -2.41
HSPG2P98160 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.02□□□□□ -2.41
HSPG2P98160 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.02□□□□□ -2.41
HSPG2P98160 RPL7P43-201ENST00000478876 753 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AC012213.3-201ENST00000577199 777 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 SNORA77B-201ENST00000578179 125 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AP005212.4-201ENST00000614206 710 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AL109659.3-201ENST00000624985 950 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 SNORA25.3-201ENST00000363205 127 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 RNU6-1327P-201ENST00000365302 105 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 RNU6-793P-201ENST00000384233 104 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.02□□□□□ -2.41
HSPG2P98160 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.02□□□□□ -2.41
HSPG2P98160 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.02□□□□□ -2.41
HSPG2P98160 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.02□□□□□ -2.41
HSPG2P98160 RNU6-567P-201ENST00000516746 107 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 RN7SKP256-201ENST00000517201 314 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.02□□□□□ -2.41
HSPG2P98160 AC016256.1-201ENST00000547971 354 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AC105148.1-201ENST00000604961 409 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 AC021851.1-201ENST00000608537 1082 ntBASIC0.02□□□□□ -2.41
HSPG2P98160 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.02□□□□□ -2.41
HSPG2P98160 MIRLET7D-201ENST00000362263 87 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SNORA4.1-201ENST00000364263 144 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SNORD89-201ENST00000390981 114 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU2-47P-201ENST00000410649 186 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC098831.1-201ENST00000440661 216 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC112771.1-201ENST00000463581 102 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RPL30P1-201ENST00000488676 339 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC110760.3-202ENST00000515177 371 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 COPS8P3-201ENST00000526024 482 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 CENPUP1-201ENST00000526649 1202 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC069304.2-201ENST00000605154 435 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 BX284668.6-201ENST00000606899 438 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC004067.1-201ENST00000608733 700 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC017104.5-201ENST00000637647 639 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SNORD18A-201ENST00000363753 72 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-945P-201ENST00000383947 107 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR597-201ENST00000384968 97 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-1300P-201ENST00000391046 108 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC138623.1-201ENST00000418060 216 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.01□□□□□ -2.41
HSPG2P98160 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.01□□□□□ -2.41
HSPG2P98160 MEMO1P3-201ENST00000459811 302 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-491P-201ENST00000516099 110 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL157871.3-201ENST00000557231 293 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL158211.1-201ENST00000566763 763 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL583856.2-201ENST00000606298 543 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC011374.2-201ENST00000607135 526 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC098614.4-201ENST00000607601 462 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC106858.1-201ENST00000637497 429 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.01□□□□□ -2.41
HSPG2P98160 SNORA32.1-201ENST00000364514 115 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU4-12P-201ENST00000365233 139 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-546P-201ENST00000383991 107 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL353621.1-201ENST00000418219 243 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 OR6C5P-201ENST00000452388 923 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL162395.1-201ENST00000457882 422 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.01□□□□□ -2.41
HSPG2P98160 AL512310.8-201ENST00000550183 120 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR3664-201ENST00000579074 99 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC008088.1-201ENST00000580993 280 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC004805.2-201ENST00000605382 482 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL133445.2-201ENST00000611191 527 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL132822.1-201ENST00000617063 513 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 U6.107-201ENST00000637108 79 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-654P-201ENST00000364373 107 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 RNU6-163P-201ENST00000384396 106 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SNORA51.10-201ENST00000384418 136 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MIR194-1-201ENST00000384892 85 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 NDUFS5P4-201ENST00000412983 318 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.01□□□□□ -2.41
HSPG2P98160 PTGES3P4-201ENST00000426243 356 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 MTCO3P5-201ENST00000433620 714 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SNORD57-201ENST00000448188 72 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 NFU1P2-201ENST00000448700 469 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 OR2AQ1P-201ENST00000451972 200 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL049830.1-201ENST00000468034 425 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC108740.1-201ENST00000498629 225 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC010460.2-201ENST00000509054 677 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 SMURF2P1-201ENST00000514992 481 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.01□□□□□ -2.41
HSPG2P98160 AC091304.9-201ENST00000612091 226 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 AC013476.2-201ENST00000614456 459 ntBASIC0.01□□□□□ -2.41
HSPG2P98160 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0□□□□□ -2.41
HSPG2P98160 RNU4-45P-201ENST00000365469 141 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC063976.4-201ENST00000421971 163 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC132479.1-201ENST00000449160 144 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms