Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC244015.1-201ENST00000622301 99 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC023934.1-201ENST00000574529 2389 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.02□□□□□ -2.41
PRKDCP78527 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNU6-444P-201ENST00000383988 108 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 Y_RNA.495-201ENST00000384435 112 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RPL32P14-201ENST00000463196 378 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC113420.1-201ENST00000507903 571 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RN7SKP256-201ENST00000517201 314 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 BNIP3P27-201ENST00000599991 412 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AF129408.1-201ENST00000608767 431 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.02□□□□□ -2.41
PRKDCP78527 SNORD49B-201ENST00000365172 72 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNU1-119P-201ENST00000391122 165 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.02□□□□□ -2.41
PRKDCP78527 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.02□□□□□ -2.41
PRKDCP78527 AC244098.3-201ENST00000424803 96 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 PTGES3P4-201ENST00000426243 356 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 BTF3P11-201ENST00000426582 477 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.02□□□□□ -2.41
PRKDCP78527 PAXBP1P1-201ENST00000449315 447 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.02□□□□□ -2.41
PRKDCP78527 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.02□□□□□ -2.41
PRKDCP78527 BPTFP1-201ENST00000579209 492 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AL596245.1-201ENST00000618994 362 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNU6-386P-201ENST00000362650 107 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 Y_RNA.100-201ENST00000363141 102 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 SNORA25B-201ENST00000365507 128 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 Y_RNA.568-201ENST00000384742 113 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 SNORD12-201ENST00000391002 90 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.01□□□□□ -2.41
PRKDCP78527 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.01□□□□□ -2.41
PRKDCP78527 SNORD116-30-201ENST00000516468 85 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 RNU6-1092P-201ENST00000516955 87 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.01□□□□□ -2.41
PRKDCP78527 BX284668.6-201ENST00000606899 438 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AP005212.4-201ENST00000614206 710 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.01□□□□□ -2.41
PRKDCP78527 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 NDUFS5P4-201ENST00000412983 318 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.01□□□□□ -2.41
PRKDCP78527 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.01□□□□□ -2.41
PRKDCP78527 RAB11AP2-201ENST00000545905 639 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 MRPS36P5-201ENST00000551909 298 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC009712.1-201ENST00000564938 316 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC012065.4-201ENST00000602445 679 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AL360219.1-201ENST00000610230 366 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 PCMTD1P7-201ENST00000634506 357 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.01□□□□□ -2.41
PRKDCP78527 MTND5P31-201ENST00000419366 1374 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
PRKDCP78527 RNA5SP205-201ENST00000364653 136 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 SNORD51-201ENST00000384320 80 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 MIR29B2-201ENST00000385055 81 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AL589655.1-201ENST00000405398 482 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 MTCO3P5-201ENST00000433620 714 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AL512844.2-201ENST00000433990 593 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.01□□□□□ -2.41
PRKDCP78527 RNU4-18P-201ENST00000516751 149 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 RNA5SP481-201ENST00000516814 122 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 RNU6-889P-201ENST00000517189 103 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AC022616.8-201ENST00000533569 253 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.01□□□□□ -2.41
PRKDCP78527 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.01□□□□□ -2.41
PRKDCP78527 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
PRKDCP78527 AC007490.1-201ENST00000624321 703 ntBASIC0.01□□□□□ -2.41
PRKDCP78527 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0□□□□□ -2.41
PRKDCP78527 AL355796.1-201ENST00000406706 323 ntBASIC0□□□□□ -2.41
PRKDCP78527 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0□□□□□ -2.41
PRKDCP78527 AC013267.1-201ENST00000458227 267 ntBASIC0□□□□□ -2.41
PRKDCP78527 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
PRKDCP78527 AC097065.2-201ENST00000608159 533 ntBASIC0□□□□□ -2.41
PRKDCP78527 uc_338.17-201ENST00000619633 179 ntBASIC0□□□□□ -2.41
PRKDCP78527 RNA5SP327-201ENST00000362494 101 ntBASIC0□□□□□ -2.41
PRKDCP78527 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
PRKDCP78527 TMSB4XP8-201ENST00000402089 135 ntBASIC0□□□□□ -2.41
PRKDCP78527 RNU6-1054P-201ENST00000411293 104 ntBASIC0□□□□□ -2.41
PRKDCP78527 TMSB4XP6-201ENST00000415187 135 ntBASIC0□□□□□ -2.41
PRKDCP78527 PDCL2P1-201ENST00000419302 352 ntBASIC0□□□□□ -2.41
PRKDCP78527 AC063976.4-201ENST00000421971 163 ntBASIC0□□□□□ -2.41
PRKDCP78527 TMSB4XP1-201ENST00000424567 135 ntBASIC0□□□□□ -2.41
PRKDCP78527 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0□□□□□ -2.41
PRKDCP78527 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0□□□□□ -2.41
PRKDCP78527 HMGN1P12-201ENST00000499125 195 ntBASIC0□□□□□ -2.41
PRKDCP78527 RNU6-202P-201ENST00000515998 96 ntBASIC0□□□□□ -2.41
PRKDCP78527 AC022523.2-201ENST00000561045 150 ntBASIC0□□□□□ -2.41
PRKDCP78527 AL590240.4-201ENST00000616908 390 ntBASIC0□□□□□ -2.41
PRKDCP78527 AC024581.2-201ENST00000619986 252 ntBASIC0□□□□□ -2.41
PRKDCP78527 7SK.10-201ENST00000621414 298 ntBASIC0□□□□□ -2.41
PRKDCP78527 AL590396.4-201ENST00000636779 956 ntBASIC0□□□□□ -2.41
PRKDCP78527 MIR3529-201ENST00000637713 78 ntBASIC0□□□□□ -2.41
PRKDCP78527 RNY4P6-201ENST00000363667 96 ntBASIC-0□□□□□ -2.41
PRKDCP78527 RNU6-167P-201ENST00000384292 106 ntBASIC-0□□□□□ -2.41
PRKDCP78527 SNORD116-13-201ENST00000384408 92 ntBASIC-0□□□□□ -2.41
PRKDCP78527 RNA5SP451-201ENST00000410588 110 ntBASIC-0□□□□□ -2.41
PRKDCP78527 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0□□□□□ -2.41
PRKDCP78527 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0□□□□□ -2.41
PRKDCP78527 AC079140.3-201ENST00000511111 550 ntBASIC-0□□□□□ -2.41
PRKDCP78527 SCARNA8-201ENST00000515924 131 ntBASIC-0□□□□□ -2.41
PRKDCP78527 ACA59.2-201ENST00000517061 156 ntBASIC-0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms