Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SUMO2P18-201ENST00000518873 252 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AC021451.1-201ENST00000523498 1129 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AC104417.1-201ENST00000523974 751 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AL157871.3-201ENST00000557231 293 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AC008751.2-201ENST00000597885 980 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.43□□□□□ -2.34
LSM3P62310 AL159153.1-201ENST00000619688 317 ntBASIC0.43□□□□□ -2.34
LSM3P62310 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.43□□□□□ -2.34
LSM3P62310 AC233981.2-201ENST00000611524 1614 ntBASIC0.42□□□□□ -2.34
LSM3P62310 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
LSM3P62310 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.42□□□□□ -2.34
LSM3P62310 SNORA63D-201ENST00000364359 132 ntBASIC0.42□□□□□ -2.34
LSM3P62310 SNORD114-24-201ENST00000365029 72 ntBASIC0.42□□□□□ -2.34
LSM3P62310 RNA5SP259-201ENST00000365541 109 ntBASIC0.42□□□□□ -2.34
LSM3P62310 MIR764-201ENST00000390811 85 ntBASIC0.42□□□□□ -2.34
LSM3P62310 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.42□□□□□ -2.34
LSM3P62310 AL365338.1-201ENST00000422282 858 ntBASIC0.42□□□□□ -2.34
LSM3P62310 EEF1E1P1-201ENST00000446998 430 ntBASIC0.42□□□□□ -2.34
LSM3P62310 RNU6-333P-201ENST00000459117 107 ntBASIC0.42□□□□□ -2.34
LSM3P62310 MTND1P3-201ENST00000484956 952 ntBASIC0.42□□□□□ -2.34
LSM3P62310 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.42□□□□□ -2.34
LSM3P62310 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.42□□□□□ -2.34
LSM3P62310 CR383656.8-201ENST00000549046 145 ntBASIC0.42□□□□□ -2.34
LSM3P62310 BNIP3P6-201ENST00000549284 499 ntBASIC0.42□□□□□ -2.34
LSM3P62310 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.42□□□□□ -2.34
LSM3P62310 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.42□□□□□ -2.34
LSM3P62310 AC107304.1-201ENST00000604229 296 ntBASIC0.42□□□□□ -2.34
LSM3P62310 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.42□□□□□ -2.34
LSM3P62310 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
LSM3P62310 MTND4P16-201ENST00000466108 1367 ntBASIC0.42□□□□□ -2.34
LSM3P62310 MTND5P33-201ENST00000571250 1450 ntBASIC0.41□□□□□ -2.34
LSM3P62310 MIR378A-201ENST00000362177 66 ntBASIC0.41□□□□□ -2.34
LSM3P62310 RNU4-12P-201ENST00000365233 139 ntBASIC0.41□□□□□ -2.34
LSM3P62310 RNU6-72P-201ENST00000384285 79 ntBASIC0.41□□□□□ -2.34
LSM3P62310 MIR301A-201ENST00000385261 86 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AL117342.1-201ENST00000404861 406 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AC092809.3-201ENST00000415453 231 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AC063976.4-201ENST00000421971 163 ntBASIC0.41□□□□□ -2.34
LSM3P62310 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM3P62310 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.41□□□□□ -2.34
LSM3P62310 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM3P62310 LARP1BP3-201ENST00000437229 869 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AC002429.1-201ENST00000437672 148 ntBASIC0.41□□□□□ -2.34
LSM3P62310 SNRPEP7-201ENST00000438350 220 ntBASIC0.41□□□□□ -2.34
LSM3P62310 GTF2IP13-201ENST00000438487 386 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AL122001.1-201ENST00000457027 370 ntBASIC0.41□□□□□ -2.34
LSM3P62310 snoU13.27-201ENST00000459278 104 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.41□□□□□ -2.34
LSM3P62310 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
LSM3P62310 AC024589.1-201ENST00000512207 263 ntBASIC0.41□□□□□ -2.34
LSM3P62310 SNORA31.2-201ENST00000516019 134 ntBASIC0.41□□□□□ -2.34
LSM3P62310 RNU6-914P-201ENST00000516749 109 ntBASIC0.41□□□□□ -2.34
LSM3P62310 DEFB131D-201ENST00000526803 184 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AL442163.3-201ENST00000554110 156 ntBASIC0.41□□□□□ -2.34
LSM3P62310 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM3P62310 AC068620.3-201ENST00000602749 560 ntBASIC0.41□□□□□ -2.34
LSM3P62310 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM3P62310 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.41□□□□□ -2.34
LSM3P62310 Y_RNA.33-201ENST00000362591 102 ntBASIC0.4□□□□□ -2.35
LSM3P62310 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
LSM3P62310 Y_RNA.327-201ENST00000365201 102 ntBASIC0.4□□□□□ -2.35
LSM3P62310 SNORA12.2-201ENST00000391040 156 ntBASIC0.4□□□□□ -2.35
LSM3P62310 RNU6-817P-201ENST00000391083 104 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AC123900.1-201ENST00000420390 96 ntBASIC0.4□□□□□ -2.35
LSM3P62310 MTCYBP5-201ENST00000423752 1135 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AL008629.1-201ENST00000438615 184 ntBASIC0.4□□□□□ -2.35
LSM3P62310 MTCO3P43-201ENST00000440974 771 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.4□□□□□ -2.35
LSM3P62310 ART2BP-201ENST00000453501 499 ntBASIC0.4□□□□□ -2.35
LSM3P62310 MTND2P30-201ENST00000456663 382 ntBASIC0.4□□□□□ -2.35
LSM3P62310 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
LSM3P62310 AC048334.1-201ENST00000477975 159 ntBASIC0.4□□□□□ -2.35
LSM3P62310 COX6CP6-201ENST00000490840 228 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.4□□□□□ -2.35
LSM3P62310 ATP5EP1-201ENST00000510257 156 ntBASIC0.4□□□□□ -2.35
LSM3P62310 RNA5SP481-201ENST00000516814 122 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AC087897.1-201ENST00000550134 156 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AL136520.1-202ENST00000555494 763 ntBASIC0.4□□□□□ -2.35
LSM3P62310 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.4□□□□□ -2.35
LSM3P62310 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AC097460.3-201ENST00000623099 442 ntBASIC0.4□□□□□ -2.35
LSM3P62310 AL133216.2-202ENST00000634512 349 ntBASIC0.4□□□□□ -2.35
LSM3P62310 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.39□□□□□ -2.35
LSM3P62310 RNU6-1284P-201ENST00000363701 100 ntBASIC0.39□□□□□ -2.35
LSM3P62310 SNORD32B-201ENST00000364460 84 ntBASIC0.39□□□□□ -2.35
LSM3P62310 RNU6-354P-201ENST00000383862 107 ntBASIC0.39□□□□□ -2.35
LSM3P62310 RNU6-610P-201ENST00000384264 107 ntBASIC0.39□□□□□ -2.35
LSM3P62310 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
LSM3P62310 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 AC013262.1-201ENST00000426710 252 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL591704.1-201ENST00000432574 275 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL591212.2-201ENST00000433923 257 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC073910.1-201ENST00000445047 438 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 AP000542.1-201ENST00000448473 371 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 ZNF886P-201ENST00000450781 723 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms