Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL122001.1-201ENST00000457027 370 ntBASIC2.23□□□□□ -2.05
VCPP55072 snoU109.2-201ENST00000459316 135 ntBASIC2.23□□□□□ -2.05
VCPP55072 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.23□□□□□ -2.05
VCPP55072 AC091133.4-201ENST00000511142 308 ntBASIC2.23□□□□□ -2.05
VCPP55072 RNU6-405P-201ENST00000516637 110 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.23□□□□□ -2.05
VCPP55072 AC024909.2-201ENST00000553035 286 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.23□□□□□ -2.05
VCPP55072 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.23□□□□□ -2.05
VCPP55072 AC087683.1-201ENST00000591187 441 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC008945.2-201ENST00000606056 604 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.23□□□□□ -2.05
VCPP55072 uc_338.11-201ENST00000619132 160 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC024581.2-201ENST00000619986 252 ntBASIC2.23□□□□□ -2.05
VCPP55072 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
VCPP55072 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.23□□□□□ -2.05
VCPP55072 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VCPP55072 RNY1P10-201ENST00000363268 113 ntBASIC2.22□□□□□ -2.05
VCPP55072 RNU6-384P-201ENST00000364900 104 ntBASIC2.22□□□□□ -2.05
VCPP55072 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
VCPP55072 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VCPP55072 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VCPP55072 CIR1P3-201ENST00000405137 479 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL353621.1-201ENST00000418219 243 ntBASIC2.22□□□□□ -2.05
VCPP55072 BTF3P4-201ENST00000418852 495 ntBASIC2.22□□□□□ -2.05
VCPP55072 USP9YP14-201ENST00000430663 563 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL441985.1-201ENST00000457727 251 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
VCPP55072 HMGB1P29-201ENST00000505659 499 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC108078.1-201ENST00000508073 725 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.22□□□□□ -2.05
VCPP55072 SCARNA16.3-201ENST00000516595 184 ntBASIC2.22□□□□□ -2.05
VCPP55072 AP003392.2-201ENST00000527269 208 ntBASIC2.22□□□□□ -2.05
VCPP55072 OR5AQ1P-201ENST00000527596 927 ntBASIC2.22□□□□□ -2.05
VCPP55072 FAM92A1P1-201ENST00000528023 890 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC118273.2-201ENST00000532092 465 ntBASIC2.22□□□□□ -2.05
VCPP55072 MIR4703-201ENST00000577728 79 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC025165.5-201ENST00000602802 578 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC091805.2-201ENST00000603848 235 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL391646.1-201ENST00000603860 190 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL138963.2-201ENST00000605137 226 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL121917.1-203ENST00000605534 577 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC008536.2-201ENST00000607284 349 ntBASIC2.22□□□□□ -2.05
VCPP55072 AC007684.1-201ENST00000609671 477 ntBASIC2.22□□□□□ -2.05
VCPP55072 Z99129.1-201ENST00000612510 255 ntBASIC2.22□□□□□ -2.05
VCPP55072 AL162373.1-201ENST00000620433 407 ntBASIC2.22□□□□□ -2.05
VCPP55072 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.22□□□□□ -2.05
VCPP55072 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
VCPP55072 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VCPP55072 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
VCPP55072 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCPP55072 RNU6-457P-201ENST00000363999 107 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU6-72P-201ENST00000384285 79 ntBASIC2.21□□□□□ -2.06
VCPP55072 SNORA46.1-201ENST00000391069 153 ntBASIC2.21□□□□□ -2.06
VCPP55072 FTH1P15-201ENST00000406984 280 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU2-2P-201ENST00000410396 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU4-46P-201ENST00000410818 138 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.21□□□□□ -2.06
VCPP55072 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCPP55072 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
VCPP55072 MTCO2P19-201ENST00000427513 598 ntBASIC2.21□□□□□ -2.06
VCPP55072 AL445646.1-201ENST00000431784 216 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC002486.1-201ENST00000435098 391 ntBASIC2.21□□□□□ -2.06
VCPP55072 AL451074.3-201ENST00000437709 472 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC016691.1-201ENST00000441321 413 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.21□□□□□ -2.06
VCPP55072 AL356010.1-201ENST00000456364 102 ntBASIC2.21□□□□□ -2.06
VCPP55072 HMGB1P30-201ENST00000492455 606 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.21□□□□□ -2.06
VCPP55072 MTND3P25-201ENST00000509243 135 ntBASIC2.21□□□□□ -2.06
VCPP55072 MTND3P5-201ENST00000512798 333 ntBASIC2.21□□□□□ -2.06
VCPP55072 TRMT112P2-201ENST00000512910 132 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC104136.1-201ENST00000512969 394 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC105417.1-201ENST00000514691 285 ntBASIC2.21□□□□□ -2.06
VCPP55072 SMURF2P1-201ENST00000514992 481 ntBASIC2.21□□□□□ -2.06
VCPP55072 SNORA25.11-201ENST00000515935 105 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU1-86P-201ENST00000516108 154 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU1-107P-201ENST00000516617 154 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
VCPP55072 NDUFA5P6-201ENST00000542110 379 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC135279.1-201ENST00000543493 504 ntBASIC2.21□□□□□ -2.06
VCPP55072 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VCPP55072 AC073539.2-201ENST00000597113 165 ntBASIC2.21□□□□□ -2.06
VCPP55072 AL359821.1-201ENST00000605519 182 ntBASIC2.21□□□□□ -2.06
VCPP55072 NDUFA8P1-201ENST00000605525 367 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC004908.3-201ENST00000610248 625 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.15-201ENST00000611544 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.16-201ENST00000613119 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.12-201ENST00000613778 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.20-201ENST00000613956 192 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.9-201ENST00000615427 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.11-201ENST00000616345 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.2-201ENST00000616535 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.3-201ENST00000617785 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.19-201ENST00000618602 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 RNU2-1-201ENST00000618664 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.6-201ENST00000619225 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 U2.5-201ENST00000619465 191 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms