Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL28P46779 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL28P46779 AL590556.1-201ENST00000423231 483 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL28P46779 C8orf59P1-201ENST00000429930 303 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
RPL28P46779 JTBP1-201ENST00000441314 247 ntBASIC0.86□□□□□ -2.27
RPL28P46779 MTND5P2-201ENST00000442927 1142 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AL360271.2-201ENST00000447710 161 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL28P46779 AC009474.2-201ENST00000451383 136 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AC134050.1-201ENST00000495088 933 ntBASIC0.86□□□□□ -2.27
RPL28P46779 SNORA3.4-201ENST00000515969 96 ntBASIC0.86□□□□□ -2.27
RPL28P46779 RNA5SP490-201ENST00000517141 136 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AC022616.6-201ENST00000520479 119 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AL161670.1-201ENST00000554348 137 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.86□□□□□ -2.27
RPL28P46779 AC018889.1-201ENST00000605372 397 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AC012409.4-201ENST00000612923 249 ntBASIC0.86□□□□□ -2.27
RPL28P46779 AL353997.5-201ENST00000618886 171 ntBASIC0.86□□□□□ -2.27
RPL28P46779 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL28P46779 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPL28P46779 RNU6-78P-201ENST00000362897 107 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RNU1-17P-201ENST00000363022 152 ntBASIC0.85□□□□□ -2.27
RPL28P46779 Y_RNA.97-201ENST00000363094 102 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RNU6-931P-201ENST00000363850 107 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RAP1BP3-201ENST00000407180 549 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RNU6-174P-201ENST00000410406 106 ntBASIC0.85□□□□□ -2.27
RPL28P46779 AL589872.1-201ENST00000426602 288 ntBASIC0.85□□□□□ -2.27
RPL28P46779 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL28P46779 MTND1P30-201ENST00000441241 901 ntBASIC0.85□□□□□ -2.27
RPL28P46779 HMGN2P18-201ENST00000450680 270 ntBASIC0.85□□□□□ -2.27
RPL28P46779 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL28P46779 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 RPL30P7-201ENST00000479312 323 ntBASIC0.85□□□□□ -2.27
RPL28P46779 AC108078.1-201ENST00000508073 725 ntBASIC0.85□□□□□ -2.27
RPL28P46779 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 RNU5F-2P-201ENST00000516066 82 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RNU1-86P-201ENST00000516108 154 ntBASIC0.85□□□□□ -2.27
RPL28P46779 RNU1-107P-201ENST00000516617 154 ntBASIC0.85□□□□□ -2.27
RPL28P46779 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 ADI1P3-201ENST00000549509 470 ntBASIC0.85□□□□□ -2.27
RPL28P46779 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL28P46779 AC104984.5-201ENST00000586878 94 ntBASIC0.85□□□□□ -2.27
RPL28P46779 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
RPL28P46779 AC131159.1-201ENST00000621854 213 ntBASIC0.85□□□□□ -2.27
RPL28P46779 AC120349.3-201ENST00000624377 529 ntBASIC0.85□□□□□ -2.27
RPL28P46779 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL28P46779 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
RPL28P46779 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL28P46779 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RPL28P46779 RNU6-1242P-201ENST00000391052 103 ntBASIC0.84□□□□□ -2.27
RPL28P46779 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL28P46779 EEF1A1P40-201ENST00000412883 573 ntBASIC0.84□□□□□ -2.27
RPL28P46779 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL28P46779 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.84□□□□□ -2.27
RPL28P46779 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL28P46779 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL28P46779 CR769776.1-201ENST00000441254 787 ntBASIC0.84□□□□□ -2.27
RPL28P46779 FTH1P25-201ENST00000447665 469 ntBASIC0.84□□□□□ -2.27
RPL28P46779 RN7SKP210-201ENST00000459176 261 ntBASIC0.84□□□□□ -2.27
RPL28P46779 HMGN1P13-201ENST00000505795 138 ntBASIC0.84□□□□□ -2.27
RPL28P46779 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL28P46779 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL28P46779 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL28P46779 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RPL28P46779 AC015712.3-201ENST00000559380 164 ntBASIC0.84□□□□□ -2.27
RPL28P46779 MIR5094-201ENST00000578766 85 ntBASIC0.84□□□□□ -2.27
RPL28P46779 BNIP3P40-201ENST00000596017 556 ntBASIC0.84□□□□□ -2.27
RPL28P46779 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL28P46779 BNIP3P31-201ENST00000604515 566 ntBASIC0.84□□□□□ -2.27
RPL28P46779 AL158032.1-201ENST00000605401 106 ntBASIC0.84□□□□□ -2.27
RPL28P46779 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.84□□□□□ -2.27
RPL28P46779 AC026585.1-201ENST00000619582 524 ntBASIC0.84□□□□□ -2.27
RPL28P46779 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL28P46779 ICE2P2-201ENST00000483823 2787 ntBASIC0.84□□□□□ -2.28
RPL28P46779 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
RPL28P46779 ZNF72P-201ENST00000425869 1908 ntBASIC0.83□□□□□ -2.28
RPL28P46779 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPL28P46779 MIR340-201ENST00000362125 95 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNU4-15P-201ENST00000362613 141 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNU6-1285P-201ENST00000363480 105 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNU6-371P-201ENST00000364283 108 ntBASIC0.83□□□□□ -2.28
RPL28P46779 Y_RNA.302-201ENST00000364997 102 ntBASIC0.83□□□□□ -2.28
RPL28P46779 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RPL28P46779 RNU6-1222P-201ENST00000384615 107 ntBASIC0.83□□□□□ -2.28
RPL28P46779 MIR618-201ENST00000385287 98 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNU6-360P-201ENST00000390944 104 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RPS15AP12-201ENST00000419498 388 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC123900.1-201ENST00000420390 96 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL28P46779 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPL28P46779 GDI2P2-201ENST00000445131 608 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AL031313.1-201ENST00000448435 256 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC079448.1-201ENST00000449377 373 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AP000797.1-201ENST00000478870 387 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL28P46779 AC097473.1-201ENST00000508142 408 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms