Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
TPM1P09493 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
TPM1P09493 EBAG9P1-201ENST00000418955 543 ntBASIC1.21□□□□□ -2.22
TPM1P09493 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM1P09493 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM1P09493 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.21□□□□□ -2.22
TPM1P09493 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
TPM1P09493 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
TPM1P09493 OR2AQ1P-201ENST00000451972 200 ntBASIC1.21□□□□□ -2.22
TPM1P09493 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
TPM1P09493 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.21□□□□□ -2.22
TPM1P09493 AC005741.1-201ENST00000511094 432 ntBASIC1.21□□□□□ -2.22
TPM1P09493 MTND2P31-201ENST00000512602 616 ntBASIC1.21□□□□□ -2.22
TPM1P09493 AC011979.2-201ENST00000527568 352 ntBASIC1.21□□□□□ -2.22
TPM1P09493 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.21□□□□□ -2.22
TPM1P09493 MTND3P19-201ENST00000603825 345 ntBASIC1.21□□□□□ -2.22
TPM1P09493 OR4G3P-201ENST00000633500 913 ntBASIC1.21□□□□□ -2.22
TPM1P09493 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RNU6-1179P-201ENST00000384667 107 ntBASIC1.2□□□□□ -2.22
TPM1P09493 MIR520A-201ENST00000384862 85 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AC123900.1-201ENST00000420390 96 ntBASIC1.2□□□□□ -2.22
TPM1P09493 EIF1P1-201ENST00000421436 341 ntBASIC1.2□□□□□ -2.22
TPM1P09493 OOSP1P1-201ENST00000423265 274 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AC007969.2-201ENST00000441891 191 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RNA5SP269-201ENST00000459032 137 ntBASIC1.2□□□□□ -2.22
TPM1P09493 SNORA59A-201ENST00000459326 152 ntBASIC1.2□□□□□ -2.22
TPM1P09493 MTCO3P9-201ENST00000506989 781 ntBASIC1.2□□□□□ -2.22
TPM1P09493 MIR449C-201ENST00000516047 92 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RNU5F-2P-201ENST00000516066 82 ntBASIC1.2□□□□□ -2.22
TPM1P09493 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM1P09493 HMGB1P33-201ENST00000563485 527 ntBASIC1.2□□□□□ -2.22
TPM1P09493 DEFB131E-202ENST00000602581 683 ntBASIC1.2□□□□□ -2.22
TPM1P09493 BNIP3P31-201ENST00000604515 566 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AC018889.1-201ENST00000605372 397 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RMST_4.1-201ENST00000616886 107 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RMST_7.1-201ENST00000621935 268 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.2□□□□□ -2.22
TPM1P09493 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AC245060.5-201ENST00000610778 3293 ntBASIC1.2□□□□□ -2.22
TPM1P09493 AL445523.1-201ENST00000451184 1362 ntBASIC1.2□□□□□ -2.22
TPM1P09493 RNY4P16-201ENST00000364768 94 ntBASIC1.19□□□□□ -2.22
TPM1P09493 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM1P09493 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
TPM1P09493 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
TPM1P09493 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TPM1P09493 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
TPM1P09493 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.19□□□□□ -2.22
TPM1P09493 AL353777.1-201ENST00000425552 326 ntBASIC1.19□□□□□ -2.22
TPM1P09493 AC134050.1-201ENST00000495088 933 ntBASIC1.19□□□□□ -2.22
TPM1P09493 RNU6-1003P-201ENST00000517099 105 ntBASIC1.19□□□□□ -2.22
TPM1P09493 RNU6-201P-201ENST00000517100 61 ntBASIC1.19□□□□□ -2.22
TPM1P09493 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.19□□□□□ -2.22
TPM1P09493 AC084364.2-201ENST00000546924 395 ntBASIC1.19□□□□□ -2.22
TPM1P09493 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM1P09493 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.19□□□□□ -2.22
TPM1P09493 MIR4307-201ENST00000582802 84 ntBASIC1.19□□□□□ -2.22
TPM1P09493 AC092140.2-201ENST00000618027 521 ntBASIC1.19□□□□□ -2.22
TPM1P09493 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.19□□□□□ -2.22
TPM1P09493 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
TPM1P09493 RPL23AP32-201ENST00000395315 459 ntBASIC1.18□□□□□ -2.22
TPM1P09493 RAP1BP3-201ENST00000407180 549 ntBASIC1.18□□□□□ -2.22
TPM1P09493 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM1P09493 MTND1P30-201ENST00000441241 901 ntBASIC1.18□□□□□ -2.22
TPM1P09493 RPL23AP94-201ENST00000512518 302 ntBASIC1.18□□□□□ -2.22
TPM1P09493 SUMO2P18-201ENST00000518873 252 ntBASIC1.18□□□□□ -2.22
TPM1P09493 MTATP6P15-201ENST00000527233 835 ntBASIC1.18□□□□□ -2.22
TPM1P09493 AC015688.6-201ENST00000577737 104 ntBASIC1.18□□□□□ -2.22
TPM1P09493 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.18□□□□□ -2.22
TPM1P09493 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM1P09493 AL158032.1-201ENST00000605401 106 ntBASIC1.18□□□□□ -2.22
TPM1P09493 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TPM1P09493 RNU6-457P-201ENST00000363999 107 ntBASIC1.17□□□□□ -2.22
TPM1P09493 MIR578-201ENST00000384828 96 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC019070.1-201ENST00000415008 1024 ntBASIC1.17□□□□□ -2.22
TPM1P09493 TOMM20P4-201ENST00000427861 435 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.17□□□□□ -2.22
TPM1P09493 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.17□□□□□ -2.22
TPM1P09493 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
TPM1P09493 RNU7-51P-201ENST00000516560 62 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC107934.1-201ENST00000522215 217 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC115990.1-201ENST00000526957 301 ntBASIC1.17□□□□□ -2.22
TPM1P09493 CYP3A52P-201ENST00000563326 91 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC092106.3-201ENST00000611308 722 ntBASIC1.17□□□□□ -2.22
TPM1P09493 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC026585.1-201ENST00000619582 524 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
TPM1P09493 AC106858.1-201ENST00000637497 429 ntBASIC1.17□□□□□ -2.22
TPM1P09493 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TPM1P09493 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TPM1P09493 MTND5P35-201ENST00000557537 1720 ntBASIC1.17□□□□□ -2.22
TPM1P09493 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TPM1P09493 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM1P09493 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TPM1P09493 MIR340-201ENST00000362125 95 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RNU6-78P-201ENST00000362897 107 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RNU1-17P-201ENST00000363022 152 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RNU6-26P-201ENST00000383985 107 ntBASIC1.16□□□□□ -2.22
TPM1P09493 U8.10-201ENST00000384260 133 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RNU6-1222P-201ENST00000384615 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms