Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATP2A1O14983 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATP2A1O14983 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
ATP2A1O14983 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 Y_RNA.100-201ENST00000363141 102 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 RNU6-748P-201ENST00000384648 107 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 FTH1P15-201ENST00000406984 280 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC007064.1-201ENST00000412238 351 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.74□□□□□ -1.97
ATP2A1O14983 RPS12P2-201ENST00000439728 269 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC010095.1-201ENST00000443543 144 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 AC117503.1-201ENST00000472241 394 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 MRPL42P6-201ENST00000486397 371 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.74□□□□□ -1.97
ATP2A1O14983 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATP2A1O14983 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.74□□□□□ -1.97
ATP2A1O14983 RNU6-1069P-201ENST00000516612 133 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AF235103.2-201ENST00000525753 346 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.74□□□□□ -1.97
ATP2A1O14983 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 MIR1273D-201ENST00000577266 86 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 MIR4648-201ENST00000580107 72 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.74□□□□□ -1.97
ATP2A1O14983 MIR5007-201ENST00000583098 95 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AL356575.1-201ENST00000603008 283 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 APOOP1-201ENST00000604695 592 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.74□□□□□ -1.97
ATP2A1O14983 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 AC011890.2-201ENST00000613393 294 ntBASIC2.74□□□□□ -1.97
ATP2A1O14983 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATP2A1O14983 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.74□□□□□ -1.97
ATP2A1O14983 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.74□□□□□ -1.97
ATP2A1O14983 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.74□□□□□ -1.97
ATP2A1O14983 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATP2A1O14983 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATP2A1O14983 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
ATP2A1O14983 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATP2A1O14983 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 RNU5E-7P-201ENST00000365290 117 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 MTND1P23-201ENST00000416931 372 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC009161.1-201ENST00000417306 376 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.73□□□□□ -1.97
ATP2A1O14983 AC092473.1-201ENST00000441098 221 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 snoU13.15-201ENST00000459407 104 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC007547.1-201ENST00000462177 490 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 RPL31P58-201ENST00000469001 379 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC083904.1-201ENST00000487828 231 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.73□□□□□ -1.97
ATP2A1O14983 AL117351.2-201ENST00000513571 157 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 RNA5SP281-201ENST00000516504 135 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AL133241.1-201ENST00000556832 487 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC090616.3-201ENST00000582184 217 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
ATP2A1O14983 AC123912.5-201ENST00000605470 343 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 AC090617.10-201ENST00000624308 134 ntBASIC2.73□□□□□ -1.97
ATP2A1O14983 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.73□□□□□ -1.97
ATP2A1O14983 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
ATP2A1O14983 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-37P-201ENST00000362692 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-78P-201ENST00000362897 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-11P-201ENST00000364234 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-25P-201ENST00000383873 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-1-201ENST00000383898 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-48P-201ENST00000384161 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-36P-201ENST00000384172 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-4P-201ENST00000384205 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-5P-201ENST00000384238 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-3P-201ENST00000384314 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-16P-201ENST00000384385 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-15P-201ENST00000384534 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 Y_RNA.530-201ENST00000384587 101 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-2-201ENST00000384627 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-29P-201ENST00000384637 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-9-201ENST00000384776 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU6-33P-201ENST00000384793 107 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RPL30P16-201ENST00000419341 429 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
ATP2A1O14983 AL365400.1-201ENST00000431854 640 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 HMGB1P31-201ENST00000437242 427 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
ATP2A1O14983 MTCO3P18-201ENST00000440206 761 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AL441985.1-201ENST00000457727 251 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 RNU7-138P-201ENST00000459479 64 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AC107626.1-201ENST00000471084 183 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AP000852.1-201ENST00000472460 573 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 MED28P2-201ENST00000475771 317 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.72□□□□□ -1.97
ATP2A1O14983 GZMAP1-201ENST00000503054 631 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 FAM206BP-201ENST00000510179 541 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 SNORA43.2-201ENST00000516652 128 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 MIR4801-201ENST00000582704 82 ntBASIC2.72□□□□□ -1.97
ATP2A1O14983 MIR5692C1-201ENST00000585309 91 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms