Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-572P-201ENST00000516724 80 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 SNORA31.19-201ENST00000517079 126 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 RNA5SP454-201ENST00000517231 127 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 MIR4795-201ENST00000584182 89 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 POLR3GP2-201ENST00000588366 668 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC243960.4-201ENST00000600532 288 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC006023.1-201ENST00000603944 259 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC104237.2-201ENST00000612456 443 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC022140.2-201ENST00000623500 188 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 RNU4-79P-201ENST00000362764 141 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 MIR196B-201ENST00000384852 84 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 RNU4-14P-201ENST00000410858 122 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC099548.1-201ENST00000421443 426 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC098614.2-201ENST00000426040 255 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 MTND1P17-201ENST00000448961 204 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 HMGB1P30-201ENST00000492455 606 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 MTND5P5-201ENST00000503764 376 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 COPS8P3-201ENST00000526024 482 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AP005597.4-201ENST00000526762 229 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC123912.5-201ENST00000605470 343 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 RMST_7.1-201ENST00000621935 268 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC138627.2-201ENST00000624202 601 ntBASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNX9Q9Y5X1 AC073544.1-201ENST00000600110 1595 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.535-201ENST00000384612 99 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AL358075.3-201ENST00000426289 226 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC009414.1-201ENST00000427200 443 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 HMGB1P9-201ENST00000429856 646 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AL627311.1-201ENST00000431514 115 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 SNORA59A-201ENST00000459326 152 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 MTCO1P29-201ENST00000496868 288 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC092436.3-201ENST00000511788 257 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC087854.1-201ENST00000519706 414 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 RNU6-323P-201ENST00000521915 107 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AL355375.2-201ENST00000574825 175 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC100830.2-201ENST00000581636 240 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 AC113139.1-201ENST00000605049 239 ntBASIC2.84□□□□□ -1.95
SNX9Q9Y5X1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SNX9Q9Y5X1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SNX9Q9Y5X1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU6-884P-201ENST00000363889 107 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU1-73P-201ENST00000383971 164 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 MIR888-201ENST00000401186 77 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 NCOR1P3-201ENST00000420479 303 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC098831.1-201ENST00000440661 216 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AL359672.1-201ENST00000442302 409 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 UBE2V1P7-201ENST00000446395 340 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 MTATP6P7-201ENST00000453315 681 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU7-138P-201ENST00000459479 64 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 MTND4P17-201ENST00000470444 350 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RPL31P41-201ENST00000477967 372 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC103975.1-201ENST00000482506 483 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU6-273P-201ENST00000516937 96 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AP005639.2-201ENST00000527592 928 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 GLYCAM1-201ENST00000546596 285 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC004486.1-201ENST00000546846 233 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC005668.1-201ENST00000571142 476 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC092608.2-201ENST00000624427 218 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AC006026.1-201ENST00000444025 1803 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms