Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC011005.2-201ENST00000487324 359 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 SNORA31.26-201ENST00000517250 137 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC011494.1-201ENST00000596454 237 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AL355877.2-201ENST00000603670 358 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 RNU6-85P-201ENST00000605989 107 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC011890.2-201ENST00000613393 294 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP25Q9UHP3 RNA5SP72-201ENST00000364442 117 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP25Q9UHP3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 MIR34B-201ENST00000385076 84 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 RNU6-750P-201ENST00000390946 107 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC096649.2-201ENST00000416186 393 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 MCFD2P1-201ENST00000417812 300 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 USMG5P1-201ENST00000425964 177 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC009414.1-201ENST00000427200 443 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 USP9YP30-201ENST00000430729 455 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 MTND5P22-201ENST00000458380 195 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 RPL7P42-201ENST00000481005 679 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC110794.1-201ENST00000505816 425 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 RNU1-86P-201ENST00000516108 154 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 MIR892C-201ENST00000516410 77 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 RNU1-107P-201ENST00000516617 154 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC006199.1-201ENST00000548728 219 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC083806.3-201ENST00000614016 455 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 MIR6134-201ENST00000617606 109 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AC092608.2-201ENST00000624427 218 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP25Q9UHP3 MTND5P16-201ENST00000460269 1703 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 AP003122.5-201ENST00000527668 3766 ntBASIC3.58□□□□□ -1.84
USP25Q9UHP3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP25Q9UHP3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP25Q9UHP3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP25Q9UHP3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP25Q9UHP3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP25Q9UHP3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP25Q9UHP3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.57□□□□□ -1.84
USP25Q9UHP3 RNU7-187P-201ENST00000458985 68 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 RNU6-1046P-201ENST00000516538 107 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
USP25Q9UHP3 OR1M4P-201ENST00000589199 287 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 UCA1.1-201ENST00000620952 75 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 AC091925.1-201ENST00000623204 462 ntBASIC3.57□□□□□ -1.84
USP25Q9UHP3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP25Q9UHP3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
USP25Q9UHP3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP25Q9UHP3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP25Q9UHP3 RNU6-490P-201ENST00000362985 107 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 Y_RNA.133-201ENST00000363428 110 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 SNORD14B-201ENST00000364533 90 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 RNU6-306P-201ENST00000384617 107 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 MIR490-201ENST00000384865 128 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 MIR10A-201ENST00000385043 110 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL592148.1-201ENST00000413568 445 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AC113618.1-201ENST00000416747 285 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL358176.2-201ENST00000425769 204 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL358075.3-201ENST00000426289 226 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 AP004217.1-201ENST00000480579 346 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 RNU6-470P-201ENST00000515954 104 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 RNU6-307P-201ENST00000516743 106 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.56□□□□□ -1.84
USP25Q9UHP3 AC005899.2-201ENST00000584353 90 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 AC096577.2-201ENST00000611455 153 ntBASIC3.56□□□□□ -1.84
USP25Q9UHP3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP25Q9UHP3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP25Q9UHP3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP25Q9UHP3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC010889.1-201ENST00000566193 2666 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 CDC27P3-201ENST00000635418 1910 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 RNU6-596P-201ENST00000365395 98 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 RNU6-898P-201ENST00000365627 104 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 SNORA9-201ENST00000384215 133 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 SNORA41-201ENST00000384675 132 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 MIR517A-201ENST00000385001 87 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AL031121.1-201ENST00000406553 254 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms