Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 Y_RNA.164-201ENST00000363709 102 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNA5SP493-201ENST00000364115 91 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNU6-413P-201ENST00000384115 107 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNU6-72P-201ENST00000384285 79 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC139712.2-201ENST00000424302 339 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 TIMM9P1-201ENST00000436122 256 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 NDUFB1P2-201ENST00000449477 176 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.95□□□□□ -2.26
CISHQ9NSE2 RPL30P1-201ENST00000488676 339 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC021146.8-201ENST00000507455 733 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.95□□□□□ -2.26
CISHQ9NSE2 CBX3P8-201ENST00000532412 525 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC008015.1-201ENST00000555505 465 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC025678.1-201ENST00000567861 338 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 VN1R107P-201ENST00000601784 209 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC022022.2-201ENST00000602989 360 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNU6-88P-201ENST00000606801 100 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC084824.5-201ENST00000612009 413 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 AC130454.1-201ENST00000622948 401 ntBASIC0.95□□□□□ -2.26
CISHQ9NSE2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.95□□□□□ -2.26
CISHQ9NSE2 MIR412-201ENST00000362142 91 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 RNU6-743P-201ENST00000364151 106 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 SMIM11P1-201ENST00000369586 178 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 SNORA75B-201ENST00000384053 137 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 MIR1276-201ENST00000408707 83 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 MIR1267-201ENST00000408723 78 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 Y_RNA.623-201ENST00000411128 95 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 VPS26BP1-201ENST00000417155 755 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL627311.1-201ENST00000431514 115 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CISHQ9NSE2 RPL23AP35-201ENST00000451906 501 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL353752.1-201ENST00000454946 260 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC006026.2-201ENST00000457376 180 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL139824.2-201ENST00000458731 1095 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 RNU6-333P-201ENST00000459117 107 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 AF131216.2-201ENST00000512316 564 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 VN1R82P-201ENST00000601481 356 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL022154.1-201ENST00000604698 785 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AL355472.4-201ENST00000610233 626 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 MIR8070-201ENST00000616510 88 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC007792.1-201ENST00000623023 402 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 SCARNA4-202ENST00000625402 129 ntBASIC0.94□□□□□ -2.26
CISHQ9NSE2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.94□□□□□ -2.26
CISHQ9NSE2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CISHQ9NSE2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CISHQ9NSE2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CISHQ9NSE2 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 RNU6-212P-201ENST00000362642 104 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 SNORA18.2-201ENST00000383865 132 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 RNU6-190P-201ENST00000384154 102 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.93□□□□□ -2.26
CISHQ9NSE2 ELOCP17-201ENST00000414751 326 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 ELOCP9-201ENST00000418624 239 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.93□□□□□ -2.26
CISHQ9NSE2 RPS15AP10-201ENST00000432472 382 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 LARP1BP3-201ENST00000437229 869 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 AC027119.1-201ENST00000440877 241 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.93□□□□□ -2.26
CISHQ9NSE2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.93□□□□□ -2.26
CISHQ9NSE2 AL133373.1-201ENST00000497098 94 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 AC068587.4-201ENST00000533893 186 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CISHQ9NSE2 AC090115.3-201ENST00000553218 849 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.93□□□□□ -2.26
CISHQ9NSE2 KC877982.1-201ENST00000602313 470 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 MIR1248-201ENST00000629190 106 ntBASIC0.93□□□□□ -2.26
CISHQ9NSE2 OR4G2P-201ENST00000328113 903 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 SNORD33-201ENST00000362761 85 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 RNU6-112P-201ENST00000363599 104 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 RNU1-93P-201ENST00000364704 169 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 SNORD1A-201ENST00000364968 72 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 SNORA70.7-201ENST00000384159 133 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 RNU2-62P-201ENST00000410868 191 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.92□□□□□ -2.26
CISHQ9NSE2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
CISHQ9NSE2 UBE2V1P8-201ENST00000437166 265 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.92□□□□□ -2.26
CISHQ9NSE2 AC093899.1-201ENST00000457984 376 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 RNU1-131P-201ENST00000458943 161 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 HMGN1P13-201ENST00000505795 138 ntBASIC0.92□□□□□ -2.26
CISHQ9NSE2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms