Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR320C1-201ENST00000408566 88 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 RNA5SP390-201ENST00000410191 113 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 RNU2-23P-201ENST00000410545 195 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 CBX3P6-201ENST00000430257 527 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 EEF1E1P1-201ENST00000446998 430 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC012308.1-201ENST00000451232 178 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AL136520.1-202ENST00000555494 763 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 BNIP3P30-201ENST00000601184 574 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC012065.4-201ENST00000602445 679 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC007363.1-201ENST00000604736 620 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 Z82243.1-201ENST00000609432 473 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC018926.1-201ENST00000616335 435 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 MIR6767-201ENST00000637302 66 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC099654.8-201ENST00000637757 681 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RNU6-462P-201ENST00000362659 105 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RNU6-777P-201ENST00000364265 104 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RNU6-701P-201ENST00000384059 107 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC119751.3-201ENST00000399720 670 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RNU6-333P-201ENST00000459117 107 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 SNORD97-201ENST00000459187 142 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC087477.1-201ENST00000465747 340 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RPL30P12-201ENST00000474666 353 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC008837.2-201ENST00000513076 418 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 RAB11AP2-201ENST00000545905 639 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 HSPE1P4-201ENST00000550617 308 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AL157871.3-201ENST00000557231 293 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC004908.3-201ENST00000610248 625 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AL136313.1-201ENST00000624804 202 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 AC008993.2-201ENST00000631744 806 ntBASIC1.26□□□□□ -2.21
UPF3BQ9BZI7 Y_RNA.33-201ENST00000362591 102 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNU6-942P-201ENST00000363002 107 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNU6-395P-201ENST00000365662 106 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNU6-439P-201ENST00000384188 106 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNU6-1025P-201ENST00000410629 104 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AC139712.2-201ENST00000424302 339 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AL583843.1-201ENST00000456070 346 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 HMGB1P30-201ENST00000492455 606 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 RNVU1-2-201ENST00000516326 135 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 SNORA31.16-201ENST00000516773 139 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 AC090517.3-201ENST00000625170 141 ntBASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.25□□□□□ -2.21
UPF3BQ9BZI7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 RNU6-160P-201ENST00000384591 107 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 MIR1305-201ENST00000408300 86 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 UBE2V1P10-201ENST00000414685 269 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC092648.1-201ENST00000425870 423 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AL606517.1-201ENST00000446914 387 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC093259.1-201ENST00000509755 300 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC079395.1-201ENST00000510981 262 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 LRRC6P1-201ENST00000532188 885 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC005786.1-201ENST00000588553 154 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC245297.2-201ENST00000610119 565 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC092140.2-201ENST00000618027 521 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AC009269.6-201ENST00000621778 588 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 AP000943.4-201ENST00000622912 357 ntBASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPF3BQ9BZI7 RNU6-858P-201ENST00000362436 107 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 HMGN1P14-201ENST00000412459 517 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AL591212.2-201ENST00000433923 257 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 GDI2P2-201ENST00000445131 608 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 SNORA31.17-201ENST00000516953 127 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AC092325.1-201ENST00000566449 554 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 AC006270.3-201ENST00000605967 1036 ntBASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms