Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 USMG5P1-201ENST00000425964 177 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 snoU13.26-201ENST00000459452 105 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 AP004607.1-201ENST00000524456 203 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 CYP4A43P-201ENST00000568156 121 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 AC008121.1-201ENST00000603244 268 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 MTND4LP5-201ENST00000605152 292 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 AC062037.2-201ENST00000610137 73 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 MIR6134-201ENST00000617606 109 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 ADAM3A-203ENST00000461344 2157 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.257-201ENST00000364596 102 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 SNORA70B-201ENST00000384210 135 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RNU6-72P-201ENST00000384285 79 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RNU6-823P-201ENST00000391042 103 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RNU6-101P-201ENST00000410323 104 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RNU6-293P-201ENST00000411259 106 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 PCNPP5-201ENST00000452246 481 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RPL22P13-201ENST00000493291 347 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RNA5SP208-201ENST00000516156 78 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 MIR2114-201ENST00000516645 80 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 SNORA31.21-201ENST00000517180 77 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AC025423.5-201ENST00000550230 219 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 AL161423.1-201ENST00000613700 262 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN3Q9BTN0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 MAPK10-253ENST00000641010 4072 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AL603908.1-201ENST00000406098 201 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 RNU2-23P-201ENST00000410545 195 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AL645568.3-201ENST00000433683 316 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 HMGN2P10-201ENST00000448085 265 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AC084198.1-201ENST00000477747 402 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AC096745.1-201ENST00000509945 370 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 RNU6-475P-201ENST00000516073 104 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 RNU4-77P-201ENST00000516692 156 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 AC006557.5-201ENST00000603126 811 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 SNORD58B-201ENST00000607313 66 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN3Q9BTN0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNU1-105P-201ENST00000363470 161 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 SNORA14A-201ENST00000364773 135 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNA5SP252-201ENST00000391131 119 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RNU6-55P-201ENST00000411092 107 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RPL23AP50-201ENST00000434149 455 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC124916.1-201ENST00000444020 547 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC125238.1-201ENST00000448842 249 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC109925.1-201ENST00000478069 331 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms