Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMC6Q96SB8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMC6Q96SB8 Y_RNA.135-201ENST00000363439 95 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 Y_RNA.414-201ENST00000384011 101 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AL133475.1-201ENST00000404414 305 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 SNORD56-201ENST00000413522 71 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC009161.1-201ENST00000417306 376 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 RPS29P26-201ENST00000477483 171 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC114781.4-201ENST00000513707 639 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 SNORA31.6-201ENST00000516241 130 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC087854.1-201ENST00000519706 414 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC100830.2-201ENST00000581636 240 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 AC123912.5-201ENST00000605470 343 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 U4.7-201ENST00000638126 106 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 HAUS6P2-201ENST00000433254 2404 ntBASIC2.69□□□□□ -1.98
SMC6Q96SB8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMC6Q96SB8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMC6Q96SB8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
SMC6Q96SB8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.68□□□□□ -1.98
SMC6Q96SB8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMC6Q96SB8 Y_RNA.166-201ENST00000363730 102 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMC6Q96SB8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SMC6Q96SB8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMC6Q96SB8 SNORA11.2-201ENST00000408318 127 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AL117339.3-201ENST00000418733 162 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 PTGES3P4-201ENST00000426243 356 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC236972.1-201ENST00000433225 199 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC112220.1-201ENST00000434628 355 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC004383.1-201ENST00000438135 289 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 MRPL42P6-201ENST00000486397 371 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.68□□□□□ -1.98
SMC6Q96SB8 RNU6-864P-201ENST00000516256 108 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 SNORA43.2-201ENST00000516652 128 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC109479.2-201ENST00000517842 174 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC009163.5-201ENST00000575421 637 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.68□□□□□ -1.98
SMC6Q96SB8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC022306.2-201ENST00000617563 647 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 AC100810.6-201ENST00000638068 285 ntBASIC2.68□□□□□ -1.98
SMC6Q96SB8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMC6Q96SB8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 RNU6-78P-201ENST00000362897 107 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 Y_RNA.303-201ENST00000364998 94 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RNU6-487P-201ENST00000365430 104 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 Y_RNA.373-201ENST00000365600 103 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 RNU6-831P-201ENST00000384548 107 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RNU6-748P-201ENST00000384648 107 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 MIR147B-201ENST00000390185 80 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RPL21P111-201ENST00000418453 477 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 MTATP6P23-201ENST00000440153 476 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 OSTCP8-201ENST00000445117 448 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC006026.2-201ENST00000457376 180 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 UBE2DNL-203ENST00000474922 222 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RPL23AP45-201ENST00000476406 468 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RPL7P43-201ENST00000478876 753 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 RPL23AP70-201ENST00000483361 460 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC046134.1-201ENST00000514454 666 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AP005597.4-201ENST00000526762 229 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC087241.2-201ENST00000535801 324 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC103810.1-201ENST00000579873 453 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 VN1R107P-201ENST00000601784 209 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 AL121757.2-201ENST00000611223 313 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 AC138627.2-201ENST00000624202 601 ntBASIC2.67□□□□□ -1.98
SMC6Q96SB8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.67□□□□□ -1.98
SMC6Q96SB8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMC6Q96SB8 RNU6-37P-201ENST00000362692 107 ntBASIC2.66□□□□□ -1.98
SMC6Q96SB8 Y_RNA.160-201ENST00000363677 92 ntBASIC2.66□□□□□ -1.98
SMC6Q96SB8 RNU6-11P-201ENST00000364234 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms