Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 snoU13.15-201ENST00000459407 104 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 ARL2BPP4-201ENST00000506854 471 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 Y_RNA.695-201ENST00000516715 107 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC026407.1-201ENST00000518369 204 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC034114.1-201ENST00000520293 285 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AP002963.1-201ENST00000530590 184 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 MTND3P12-201ENST00000559068 328 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 MIR4703-201ENST00000577728 79 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AL158063.1-201ENST00000615349 536 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ZNF560Q96MR9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC007969.2-201ENST00000441891 191 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC010095.1-201ENST00000443543 144 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 USP9YP29-201ENST00000445112 563 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 MTND1P18-201ENST00000448191 573 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 C1DP4-201ENST00000455429 424 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 RNU6-430P-201ENST00000517078 107 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AL391840.1-201ENST00000571144 367 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AC009314.1-201ENST00000603871 304 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AL159153.1-201ENST00000619688 317 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 U4.7-201ENST00000638126 106 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
ZNF560Q96MR9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ZNF560Q96MR9 RNU2-2P-201ENST00000410396 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 MTCO2P11-201ENST00000431069 680 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AC105417.1-201ENST00000514691 285 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AC233702.2-202ENST00000562547 291 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 MIR4528-201ENST00000577763 90 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 AL136363.2-201ENST00000604173 851 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 ELOCP5-201ENST00000604924 333 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.15-201ENST00000611544 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.16-201ENST00000613119 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.12-201ENST00000613778 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.20-201ENST00000613956 192 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.9-201ENST00000615427 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.11-201ENST00000616345 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.2-201ENST00000616535 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.3-201ENST00000617785 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.19-201ENST00000618602 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 RNU2-1-201ENST00000618664 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.6-201ENST00000619225 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.5-201ENST00000619465 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 U2.10-201ENST00000620268 191 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 MIR3974-201ENST00000637126 96 ntBASIC2.15□□□□□ -2.07
ZNF560Q96MR9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ZNF560Q96MR9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.15□□□□□ -2.07
ZNF560Q96MR9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RNU6-1120P-201ENST00000362988 108 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RNU6-348P-201ENST00000384386 107 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AC090960.1-201ENST00000421072 306 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AC027124.2-201ENST00000428249 105 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AL591043.1-201ENST00000432461 424 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 UBL5P3-201ENST00000475112 231 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AC079140.5-201ENST00000507882 310 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 MTCO3P7-201ENST00000510008 774 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 SNORA4.4-201ENST00000515921 135 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RN7SKP256-201ENST00000517201 314 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 AC078899.2-201ENST00000595282 212 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
ZNF560Q96MR9 Z69908.1-201ENST00000622603 247 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.14□□□□□ -2.07
ZNF560Q96MR9 RNU6-212P-201ENST00000362642 104 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms