Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR3118-1-201ENST00000581787 76 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AL138889.2-201ENST00000603883 242 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AC112187.2-201ENST00000604345 283 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AL355802.3-201ENST00000607571 545 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AC097478.2-201ENST00000610572 514 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AC093648.1-201ENST00000623546 606 ntBASIC1.02□□□□□ -2.25
LRRC28Q86X40 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC28Q86X40 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC28Q86X40 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
LRRC28Q86X40 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LRRC28Q86X40 MIR412-201ENST00000362142 91 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 RNU1-58P-201ENST00000362413 163 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 Y_RNA.164-201ENST00000363709 102 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 RNU6-384P-201ENST00000364900 104 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 RNU6-190P-201ENST00000384154 102 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 SRIP3-201ENST00000413200 219 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 AC009518.2-201ENST00000418056 731 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 AL627311.1-201ENST00000431514 115 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 AC093899.1-201ENST00000457984 376 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 snoU109.3-201ENST00000459477 145 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 RNA5SP445-201ENST00000515889 115 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 AC098848.2-201ENST00000588023 330 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 WISP1-OT1-201ENST00000602893 642 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 AC009269.6-201ENST00000621778 588 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 AP002782.1-201ENST00000623107 614 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 AP002371.2-201ENST00000624450 503 ntBASIC1.01□□□□□ -2.25
LRRC28Q86X40 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.01□□□□□ -2.25
LRRC28Q86X40 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
LRRC28Q86X40 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
LRRC28Q86X40 ZNF680P1-201ENST00000436625 1469 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1□□□□□ -2.25
LRRC28Q86X40 RNU6-1210P-201ENST00000363775 107 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 RNY4P16-201ENST00000364768 94 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 RNU4-91P-201ENST00000364778 135 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 RNU6-546P-201ENST00000383991 107 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 RNA5SP100-201ENST00000410903 110 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 RNA5SP59-201ENST00000410922 110 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 UBE2V1P10-201ENST00000414685 269 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1□□□□□ -2.25
LRRC28Q86X40 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1□□□□□ -2.25
LRRC28Q86X40 AC084290.1-201ENST00000434995 374 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1□□□□□ -2.25
LRRC28Q86X40 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 HMGN1P7-201ENST00000491722 313 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 Y_RNA.689-201ENST00000516589 107 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 5S_rRNA.3-201ENST00000517021 110 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1□□□□□ -2.25
LRRC28Q86X40 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1□□□□□ -2.25
LRRC28Q86X40 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1□□□□□ -2.25
LRRC28Q86X40 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1□□□□□ -2.25
LRRC28Q86X40 5S_rRNA.19-201ENST00000612131 110 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1□□□□□ -2.25
LRRC28Q86X40 5S_rRNA.18-201ENST00000621941 110 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 AC091895.1-201ENST00000624494 256 ntBASIC1□□□□□ -2.25
LRRC28Q86X40 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LRRC28Q86X40 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1□□□□□ -2.25
LRRC28Q86X40 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AL445523.1-201ENST00000451184 1362 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AL391994.1-201ENST00000254724 282 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LRRC28Q86X40 RNU5E-1-201ENST00000362477 120 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 RNU6-655P-201ENST00000362858 107 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 Y_RNA.302-201ENST00000364997 102 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 RNU6-636P-201ENST00000384598 107 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 MIR618-201ENST00000385287 98 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 SNORA48.1-201ENST00000390879 135 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 RPL37P10-201ENST00000412884 288 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 MTCO2P21-201ENST00000419780 677 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AL022238.1-201ENST00000442557 355 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 HMGN2P18-201ENST00000450680 270 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 RPL23AP35-201ENST00000451906 501 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC022616.6-201ENST00000520479 119 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 MTATP6P15-201ENST00000527233 835 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC28Q86X40 BNIP3P40-201ENST00000596017 556 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC078795.2-201ENST00000602835 1252 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AP002360.4-201ENST00000606980 481 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AL157392.4-201ENST00000609756 345 ntBASIC0.99□□□□□ -2.25
LRRC28Q86X40 AC024940.5-201ENST00000622889 474 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms