Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-29P-201ENST00000384637 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-9-201ENST00000384776 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-33P-201ENST00000384793 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.599-201ENST00000410489 109 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 ERLEC1P1-201ENST00000433806 578 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC012308.1-201ENST00000451232 178 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-1208P-201ENST00000459588 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RPS27AP9-201ENST00000477681 438 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AL049873.1-201ENST00000480540 376 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 SNORA14.1-201ENST00000516113 141 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-1038P-201ENST00000516516 104 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC109479.2-201ENST00000517842 174 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 MTND1P35-201ENST00000526739 508 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC079598.5-201ENST00000547460 117 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC078814.3-201ENST00000553036 491 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC010525.2-201ENST00000590920 195 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC092747.3-201ENST00000603769 301 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 APOOP1-201ENST00000604695 592 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AL138963.2-201ENST00000605137 226 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC021646.1-201ENST00000605469 484 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-89P-201ENST00000606519 100 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-6P-201ENST00000606623 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 AC092807.2-201ENST00000609367 243 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 MIR3688-2-201ENST00000636963 87 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 U4.7-201ENST00000638126 106 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.89-201ENST00000363031 102 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SNORD115-47-201ENST00000391226 86 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.619-201ENST00000410951 90 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 RNA5SP184-201ENST00000411071 108 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SNORD56-201ENST00000413522 71 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SRIP2-201ENST00000428470 166 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC008571.1-201ENST00000467232 300 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 RPL23AP45-201ENST00000476406 468 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC090525.1-201ENST00000479116 478 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC096725.1-201ENST00000514266 313 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 SMURF2P1-201ENST00000514992 481 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 RNA5SP356-201ENST00000515972 94 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC146944.4-201ENST00000602697 718 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC123912.5-201ENST00000605470 343 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 AC121333.1-201ENST00000567488 2709 ntBASIC2.47□□□□□ -2.01
NUP54Q7Z3B4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 RNU6-522P-201ENST00000364497 107 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 RNU6-534P-201ENST00000364877 106 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 RNU6-877P-201ENST00000383868 107 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 SNORA6-201ENST00000384033 151 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 Y_RNA.453-201ENST00000384223 109 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 MIR634-201ENST00000385208 97 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC074117.2-201ENST00000417130 397 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC087884.1-201ENST00000469738 328 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 SNORA31.23-201ENST00000517219 133 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 COPS8P3-201ENST00000526024 482 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AP003033.1-201ENST00000527244 415 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AL121917.1-203ENST00000605534 577 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AL161423.1-201ENST00000613700 262 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 AP006437.1-201ENST00000641440 3685 ntBASIC2.46□□□□□ -2.02
NUP54Q7Z3B4 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 Y_RNA.167-201ENST00000363735 109 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 Y_RNA.256-201ENST00000364594 104 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 RNU6-622P-201ENST00000384272 103 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 MIR23A-201ENST00000385245 73 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 RNA5SP390-201ENST00000410191 113 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms