Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 RPS4XP22-201ENST00000480755 780 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC140059.1-201ENST00000489238 361 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 RNU6-966P-201ENST00000516479 104 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AP003730.1-201ENST00000524605 285 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AL360157.1-201ENST00000565962 87 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC025627.2-201ENST00000576220 160 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MIR4700-201ENST00000578311 74 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC019159.1-201ENST00000605094 187 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MIR7151-201ENST00000617477 60 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC091895.1-201ENST00000624494 256 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 snoU18.1-201ENST00000629629 71 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AL773545.4-201ENST00000637262 310 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AL513478.4-201ENST00000641636 310 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MAPK10-253ENST00000641010 4072 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 ZNF962P-201ENST00000443465 3140 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.81-201ENST00000362997 102 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 RNU4-80P-201ENST00000363200 141 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 RN7SKP280-201ENST00000364196 304 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 SNORA72.2-201ENST00000365028 127 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 RNU6-211P-201ENST00000384047 107 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 RNU6-213P-201ENST00000384051 104 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AL357139.1-201ENST00000407792 426 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 MIR1251-201ENST00000408552 70 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.595-201ENST00000410403 105 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 RNA5SP306-201ENST00000411087 107 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC074117.2-201ENST00000417130 397 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AL512844.2-201ENST00000433990 593 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC005042.3-201ENST00000453230 174 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC136624.4-201ENST00000573044 370 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 MIR3138-201ENST00000585238 82 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC020914.4-201ENST00000597690 277 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC022441.3-201ENST00000605737 136 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 FTX_3.1-201ENST00000610451 147 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC048347.1-201ENST00000624621 427 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF20Q5VTR2 AC118273.1-201ENST00000525324 3006 ntBASIC4.86□□□□□ -1.63
RNF20Q5VTR2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-137P-201ENST00000363680 108 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-873P-201ENST00000363833 107 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.343-201ENST00000365354 112 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-1027P-201ENST00000383998 107 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-959P-201ENST00000384671 107 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-735P-201ENST00000410612 107 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AL358075.3-201ENST00000426289 226 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RPL21P66-201ENST00000426566 466 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AC007969.2-201ENST00000441891 191 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 MTATP6P7-201ENST00000453315 681 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AC097462.2-201ENST00000504623 481 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-62P-201ENST00000516526 102 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 RNU6-1198P-201ENST00000516904 67 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AC016256.1-201ENST00000547971 354 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 MIR5571-201ENST00000577998 113 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 ARF4P1-201ENST00000605447 541 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AL445567.2-201ENST00000618935 498 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 AC092628.2-201ENST00000622492 339 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 MTND1P7-201ENST00000632801 297 ntBASIC4.85□□□□□ -1.63
RNF20Q5VTR2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF20Q5VTR2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 LINC02471-203ENST00000641941 4752 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RNU6-417P-201ENST00000384712 107 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 MIR493-201ENST00000385254 89 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RNU6-1154P-201ENST00000391001 104 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RNU6-131P-201ENST00000391144 107 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AL049830.2-201ENST00000480072 201 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RN7SKP122-201ENST00000515923 296 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms