Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP001893.2-201ENST00000526949 202 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC104229.1-201ENST00000561364 255 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC58Q4VC31 MIR4666A-201ENST00000580160 79 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 MTATP6P3-201ENST00000581686 676 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 FAM106DP-201ENST00000586416 501 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 BNIP3P30-201ENST00000601184 574 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC022022.2-201ENST00000602989 360 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 MIR6516-201ENST00000630554 81 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 MIR3529-201ENST00000637713 78 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 ELL2P3-201ENST00000457883 1602 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC023934.1-201ENST00000574529 2389 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AL442644.1-201ENST00000454390 3105 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 RNU6-331P-201ENST00000384724 107 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AL357139.1-201ENST00000407792 426 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 snoU13.14-201ENST00000459372 104 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 RNA5SP255-201ENST00000516370 107 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC136443.5-201ENST00000603741 370 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 AC083806.3-201ENST00000614016 455 ntBASIC0.29□□□□□ -2.36
CCDC58Q4VC31 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CCDC58Q4VC31 RNU6-858P-201ENST00000362436 107 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 Y_RNA.40-201ENST00000362645 93 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 RNU6-843P-201ENST00000384454 104 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 MIR942-201ENST00000401111 86 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 MTCO1P56-201ENST00000401674 224 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 Y_RNA.597-201ENST00000410463 100 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AL008629.1-201ENST00000438615 184 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AL353752.1-201ENST00000454946 260 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC010631.1-201ENST00000474150 156 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 SNORA31.2-201ENST00000516019 134 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 SUMO2P18-201ENST00000518873 252 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC009902.1-201ENST00000519351 183 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC104417.1-201ENST00000523974 751 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC006518.2-201ENST00000542513 940 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC044913.1-201ENST00000557200 430 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC078795.2-201ENST00000602835 1252 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AP000654.2-201ENST00000605633 586 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.28□□□□□ -2.36
CCDC58Q4VC31 MIR6715A-201ENST00000615929 79 ntBASIC0.28□□□□□ -2.36
CCDC58Q4VC31 Y_RNA.25-201ENST00000362528 102 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 SNORA63D-201ENST00000364359 132 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 Y_RNA.332-201ENST00000365271 113 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.27□□□□□ -2.37
CCDC58Q4VC31 UBE2V1P10-201ENST00000414685 269 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 TXNL1P1-201ENST00000429528 554 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC099677.2-201ENST00000436385 175 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 snoU13.27-201ENST00000459278 104 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC114981.1-201ENST00000503897 678 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC079140.3-201ENST00000511111 550 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 RNU6-229P-201ENST00000516614 102 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 RNU6-1261P-201ENST00000517194 104 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC092451.2-201ENST00000538746 658 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 MIR4769-201ENST00000584126 77 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 AC104984.5-201ENST00000586878 94 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 OR4G1P-203ENST00000641984 1631 ntBASIC0.27□□□□□ -2.37
CCDC58Q4VC31 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 RAB28P5-201ENST00000427490 651 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 RPS15AP10-201ENST00000432472 382 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 snoU13.30-201ENST00000458951 104 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC126365.2-201ENST00000580630 379 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AC105148.1-201ENST00000604961 409 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 AL357080.1-201ENST00000617394 239 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.26□□□□□ -2.37
CCDC58Q4VC31 RNU6-1207P-201ENST00000384343 107 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 RNU6-14P-201ENST00000384630 106 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 RNU2-23P-201ENST00000410545 195 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC098934.3-201ENST00000430450 190 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC012308.1-201ENST00000451232 178 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms