Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC010095.1-201ENST00000443543 144 ntBASIC1.05□□□□□ -2.24
TPM3P06753 PRPS1P1-201ENST00000445305 876 ntBASIC1.05□□□□□ -2.24
TPM3P06753 NDUFB1P2-201ENST00000449477 176 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.05□□□□□ -2.24
TPM3P06753 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC021146.8-201ENST00000507455 733 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC119751.4-201ENST00000507498 357 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC097473.1-201ENST00000508142 408 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC079395.1-201ENST00000510981 262 ntBASIC1.05□□□□□ -2.24
TPM3P06753 RNA5SP490-201ENST00000517141 136 ntBASIC1.05□□□□□ -2.24
TPM3P06753 CENPUP1-201ENST00000526649 1202 ntBASIC1.05□□□□□ -2.24
TPM3P06753 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
TPM3P06753 AC015688.6-201ENST00000577737 104 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AP003465.2-201ENST00000602571 373 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC112220.3-201ENST00000605502 502 ntBASIC1.05□□□□□ -2.24
TPM3P06753 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.05□□□□□ -2.24
TPM3P06753 AC131235.4-201ENST00000609288 620 ntBASIC1.05□□□□□ -2.24
TPM3P06753 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.05□□□□□ -2.24
TPM3P06753 RNU1-22P-201ENST00000363334 158 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.04□□□□□ -2.24
TPM3P06753 AL590556.1-201ENST00000423231 483 ntBASIC1.04□□□□□ -2.24
TPM3P06753 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM3P06753 RPS27AP8-201ENST00000452665 445 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.04□□□□□ -2.24
TPM3P06753 AC091163.3-201ENST00000518269 1144 ntBASIC1.04□□□□□ -2.24
TPM3P06753 LRRC6P1-201ENST00000532188 885 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.04□□□□□ -2.24
TPM3P06753 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM3P06753 AC136932.1-201ENST00000574771 208 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC004492.1-201ENST00000607036 742 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.04□□□□□ -2.24
TPM3P06753 AC024940.5-201ENST00000622889 474 ntBASIC1.04□□□□□ -2.24
TPM3P06753 SCARNA4-202ENST00000625402 129 ntBASIC1.04□□□□□ -2.24
TPM3P06753 AC245060.5-201ENST00000610778 3293 ntBASIC1.04□□□□□ -2.24
TPM3P06753 OR4G2P-201ENST00000328113 903 ntBASIC1.03□□□□□ -2.24
TPM3P06753 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
TPM3P06753 RNU6-190P-201ENST00000384154 102 ntBASIC1.03□□□□□ -2.24
TPM3P06753 MIR520A-201ENST00000384862 85 ntBASIC1.03□□□□□ -2.24
TPM3P06753 SNORA17.3-201ENST00000391159 129 ntBASIC1.03□□□□□ -2.24
TPM3P06753 EBAG9P1-201ENST00000418955 543 ntBASIC1.03□□□□□ -2.24
TPM3P06753 RPS25P9-201ENST00000435591 252 ntBASIC1.03□□□□□ -2.24
TPM3P06753 LARP1BP3-201ENST00000437229 869 ntBASIC1.03□□□□□ -2.24
TPM3P06753 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.03□□□□□ -2.24
TPM3P06753 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM3P06753 RNA5SP269-201ENST00000459032 137 ntBASIC1.03□□□□□ -2.24
TPM3P06753 AL391001.1-201ENST00000602747 715 ntBASIC1.03□□□□□ -2.24
TPM3P06753 AL138889.2-201ENST00000603883 242 ntBASIC1.03□□□□□ -2.24
TPM3P06753 FRG1KP-201ENST00000623592 341 ntBASIC1.03□□□□□ -2.24
TPM3P06753 MTND5P35-201ENST00000557537 1720 ntBASIC1.03□□□□□ -2.24
TPM3P06753 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TPM3P06753 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
TPM3P06753 MIR10A-201ENST00000385043 110 ntBASIC1.02□□□□□ -2.25
TPM3P06753 MIR548B-201ENST00000385247 97 ntBASIC1.02□□□□□ -2.25
TPM3P06753 BTF3L4P1-201ENST00000413813 468 ntBASIC1.02□□□□□ -2.25
TPM3P06753 ELOCP17-201ENST00000414751 326 ntBASIC1.02□□□□□ -2.25
TPM3P06753 ELOCP9-201ENST00000418624 239 ntBASIC1.02□□□□□ -2.25
TPM3P06753 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM3P06753 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM3P06753 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM3P06753 AC092104.1-201ENST00000497346 1441 ntBASIC1.02□□□□□ -2.25
TPM3P06753 MTND2P33-201ENST00000506452 1031 ntBASIC1.02□□□□□ -2.25
TPM3P06753 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM3P06753 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM3P06753 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM3P06753 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM3P06753 HMGB1P33-201ENST00000563485 527 ntBASIC1.02□□□□□ -2.25
TPM3P06753 AC009712.1-201ENST00000564938 316 ntBASIC1.02□□□□□ -2.25
TPM3P06753 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM3P06753 KC877982.1-201ENST00000602313 470 ntBASIC1.02□□□□□ -2.25
TPM3P06753 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM3P06753 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
TPM3P06753 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM3P06753 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TPM3P06753 SNORA11.2-201ENST00000408318 127 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC069282.1-201ENST00000411911 526 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM3P06753 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM3P06753 AL117351.1-201ENST00000438864 766 ntBASIC1.01□□□□□ -2.25
TPM3P06753 PGBD4P5-201ENST00000445958 426 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM3P06753 FTH1P25-201ENST00000447665 469 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC006026.2-201ENST00000457376 180 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
TPM3P06753 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM3P06753 AC109445.1-201ENST00000512356 383 ntBASIC1.01□□□□□ -2.25
TPM3P06753 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
TPM3P06753 SNORA43.2-201ENST00000516652 128 ntBASIC1.01□□□□□ -2.25
TPM3P06753 RNU6-1092P-201ENST00000516955 87 ntBASIC1.01□□□□□ -2.25
TPM3P06753 RNA5SP437-201ENST00000517249 129 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC091135.1-201ENST00000585943 307 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AL136363.2-201ENST00000604173 851 ntBASIC1.01□□□□□ -2.25
TPM3P06753 BNIP3P31-201ENST00000604515 566 ntBASIC1.01□□□□□ -2.25
TPM3P06753 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM3P06753 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TPM3P06753 RMST_4.1-201ENST00000616886 107 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC009033.1-201ENST00000624279 431 ntBASIC1.01□□□□□ -2.25
TPM3P06753 AC099654.5-201ENST00000636479 350 ntBASIC1.01□□□□□ -2.25
TPM3P06753 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
TPM3P06753 RNA5SP213-201ENST00000391031 106 ntBASIC1□□□□□ -2.25
TPM3P06753 AL591806.2-201ENST00000433122 173 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms