Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC097714.1-201ENST00000511272 1647 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL2A1P02458 Y_RNA.5-201ENST00000362334 102 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 Y_RNA.47-201ENST00000362697 108 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-1287P-201ENST00000362914 107 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 U3.15-201ENST00000365398 212 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 Y_RNA.395-201ENST00000383945 109 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-1013P-201ENST00000384180 107 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 SNORA24.1-201ENST00000384401 135 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 Y_RNA.512-201ENST00000384518 102 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-1222P-201ENST00000384615 107 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-310P-201ENST00000384655 107 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-1060P-201ENST00000384664 107 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.59□□□□□ -1.99
COL2A1P02458 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL2A1P02458 FABP5P14-201ENST00000437273 393 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AL135752.1-201ENST00000479477 471 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RPL23AP41-201ENST00000484754 458 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 MTCYBP40-201ENST00000509390 1135 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNU6-295P-201ENST00000516901 104 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 RNA5SP454-201ENST00000517231 127 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.59□□□□□ -1.99
COL2A1P02458 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -1.99
COL2A1P02458 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.59□□□□□ -1.99
COL2A1P02458 MIR4703-201ENST00000577728 79 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 MIR4424-201ENST00000585257 86 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 BNIP3P25-201ENST00000596023 559 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.59□□□□□ -1.99
COL2A1P02458 AC008162.1-201ENST00000604718 254 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AL670379.4-201ENST00000605279 254 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AC006157.1-201ENST00000611750 366 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 AC130324.3-201ENST00000614165 542 ntBASIC2.59□□□□□ -1.99
COL2A1P02458 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL2A1P02458 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL2A1P02458 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
COL2A1P02458 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
COL2A1P02458 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL2A1P02458 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL2A1P02458 RNU5A-8P-201ENST00000364102 114 ntBASIC2.58□□□□□ -2
COL2A1P02458 SNORD115-7-201ENST00000365306 82 ntBASIC2.58□□□□□ -2
COL2A1P02458 OR6C66P-201ENST00000414917 930 ntBASIC2.58□□□□□ -2
COL2A1P02458 MTCYBP10-201ENST00000424905 650 ntBASIC2.58□□□□□ -2
COL2A1P02458 CBX3P6-201ENST00000430257 527 ntBASIC2.58□□□□□ -2
COL2A1P02458 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
COL2A1P02458 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.58□□□□□ -2
COL2A1P02458 BTF3P15-201ENST00000455606 336 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU6-256P-201ENST00000516747 97 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU6-64P-201ENST00000517119 105 ntBASIC2.58□□□□□ -2
COL2A1P02458 IGKV2D-36-201ENST00000518643 226 ntBASIC2.58□□□□□ -2
COL2A1P02458 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.58□□□□□ -2
COL2A1P02458 AC092470.1-201ENST00000546187 132 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR4458-201ENST00000578872 75 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR4716-201ENST00000579628 84 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR4680-201ENST00000580906 66 ntBASIC2.58□□□□□ -2
COL2A1P02458 AC024619.4-201ENST00000580924 316 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR5690-201ENST00000583739 73 ntBASIC2.58□□□□□ -2
COL2A1P02458 BNIP3P16-201ENST00000589779 534 ntBASIC2.58□□□□□ -2
COL2A1P02458 AL022099.1-201ENST00000604551 712 ntBASIC2.58□□□□□ -2
COL2A1P02458 AL158032.1-201ENST00000605401 106 ntBASIC2.58□□□□□ -2
COL2A1P02458 AC083806.3-201ENST00000614016 455 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR6128-201ENST00000615528 109 ntBASIC2.58□□□□□ -2
COL2A1P02458 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 AC009902.3-201ENST00000606235 2172 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU1-17P-201ENST00000363022 152 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
COL2A1P02458 Y_RNA.530-201ENST00000384587 101 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNA5SP219-201ENST00000390940 113 ntBASIC2.58□□□□□ -2
COL2A1P02458 MIR450B-201ENST00000401182 78 ntBASIC2.58□□□□□ -2
COL2A1P02458 SSXP10-201ENST00000402595 565 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU2-29P-201ENST00000410423 189 ntBASIC2.58□□□□□ -2
COL2A1P02458 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.58□□□□□ -2
COL2A1P02458 SKA2P1-201ENST00000425592 390 ntBASIC2.58□□□□□ -2
COL2A1P02458 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.58□□□□□ -2
COL2A1P02458 SCARNA18-201ENST00000459004 134 ntBASIC2.58□□□□□ -2
COL2A1P02458 COX7A2P2-201ENST00000505291 250 ntBASIC2.58□□□□□ -2
COL2A1P02458 RPL39P5-202ENST00000512505 151 ntBASIC2.58□□□□□ -2
COL2A1P02458 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.58□□□□□ -2
COL2A1P02458 AC104057.1-201ENST00000515547 497 ntBASIC2.58□□□□□ -2
COL2A1P02458 RNU7-51P-201ENST00000516560 62 ntBASIC2.58□□□□□ -2
COL2A1P02458 AP000889.2-201ENST00000532684 490 ntBASIC2.58□□□□□ -2
COL2A1P02458 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.58□□□□□ -2
COL2A1P02458 COX6CP3-201ENST00000580869 223 ntBASIC2.58□□□□□ -2
COL2A1P02458 NUTF2P8-201ENST00000604593 363 ntBASIC2.58□□□□□ -2
COL2A1P02458 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL2A1P02458 MTND5P30-201ENST00000452896 1731 ntBASIC2.57□□□□□ -2
COL2A1P02458 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
COL2A1P02458 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
COL2A1P02458 RNU6-179P-201ENST00000363350 107 ntBASIC2.57□□□□□ -2
COL2A1P02458 SNORA63.7-201ENST00000365579 123 ntBASIC2.57□□□□□ -2
COL2A1P02458 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL2A1P02458 Y_RNA.401-201ENST00000383965 117 ntBASIC2.57□□□□□ -2
COL2A1P02458 RNU6-601P-201ENST00000384540 107 ntBASIC2.57□□□□□ -2
COL2A1P02458 SNORA17.3-201ENST00000391159 129 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL592114.1-201ENST00000403842 483 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms