Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR6852-201ENST00000621699 66 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR412-201ENST00000362142 91 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 CD24P4-201ENST00000382840 243 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-43P-201ENST00000384302 107 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR559-201ENST00000385188 96 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-607P-201ENST00000411283 108 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC074085.1-201ENST00000413598 418 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AL353621.1-201ENST00000418219 243 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC107399.1-201ENST00000451226 265 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC008716.1-201ENST00000511084 513 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-703P-201ENST00000516946 107 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-323P-201ENST00000521915 107 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 CYCSP27-201ENST00000527643 293 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 UBL5P2-201ENST00000583788 219 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 AL031601.2-202ENST00000622650 282 ntBASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCKIPSDQ9NZQ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-384P-201ENST00000364900 104 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-738P-201ENST00000384531 106 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR606-201ENST00000384851 96 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR767-201ENST00000390228 109 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNY4P36-201ENST00000391116 96 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNA5SP354-201ENST00000391247 136 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AL360182.1-201ENST00000397433 468 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-370P-201ENST00000411008 104 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 FABP5P14-201ENST00000437273 393 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AL583843.1-201ENST00000456070 346 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 UBE2DNL-203ENST00000474922 222 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 MTND4LP22-201ENST00000508209 276 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC005741.1-201ENST00000511094 432 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SKP24-201ENST00000515888 284 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 RNA5SP76-201ENST00000516277 87 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC025423.5-201ENST00000550230 219 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 CYP2C61P-201ENST00000604072 290 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC124303.1-201ENST00000605703 360 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC084781.2-201ENST00000615568 161 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NCKIPSDQ9NZQ3 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 ADAM3A-203ENST00000461344 2157 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-562P-201ENST00000362731 107 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.202-201ENST00000364083 110 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNA5SP139-201ENST00000364340 117 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-95P-201ENST00000384697 107 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RPL37P10-201ENST00000412884 288 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AL592148.1-201ENST00000413568 445 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 BPY2DP-201ENST00000422208 265 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU7-152P-201ENST00000458982 64 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms