Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL353706.1-201ENST00000436728 494 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 MTND2P4-201ENST00000445034 1004 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 MTCO2P6-201ENST00000463134 685 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC018437.1-201ENST00000492214 406 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC104806.1-201ENST00000508720 308 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 MIR3913-1-201ENST00000577744 102 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AL138889.2-201ENST00000603883 242 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC009233.1-201ENST00000616477 371 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC138649.3-201ENST00000622154 254 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AC138393.1-203ENST00000327086 343 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU1-72P-201ENST00000362976 153 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-942P-201ENST00000363002 107 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 Y_RNA.201-201ENST00000364052 96 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-371P-201ENST00000364283 108 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 SNORA62.1-201ENST00000364287 154 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-384P-201ENST00000364900 104 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-72P-201ENST00000384285 79 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MIR1-2-201ENST00000384961 85 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MIR1302-8-201ENST00000408342 128 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-248P-201ENST00000410720 107 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL030996.1-201ENST00000411430 235 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 CALM1P1-201ENST00000442082 433 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL360271.2-201ENST00000447710 161 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MED28P2-201ENST00000475771 317 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC098862.1-201ENST00000504991 413 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC091965.2-201ENST00000512324 613 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AP002453.2-201ENST00000533503 320 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MIR3126-201ENST00000577443 74 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC064872.1-201ENST00000604823 1072 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL138963.2-201ENST00000605137 226 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC098614.4-201ENST00000607601 462 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RNU6-91P-201ENST00000607774 107 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 MTND4P1-201ENST00000457501 1466 ntBASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP3Q9H6T3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 Y_RNA.367-201ENST00000365544 101 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 SNORA17.3-201ENST00000391159 129 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU6-387P-201ENST00000411331 105 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC138623.1-201ENST00000418060 216 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 GPR143P-201ENST00000434155 205 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AL162395.1-201ENST00000457882 422 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AF213884.2-201ENST00000510417 903 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU1-86P-201ENST00000516108 154 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU1-107P-201ENST00000516617 154 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU2-44P-201ENST00000516795 194 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU6-410P-201ENST00000517006 107 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 RNU6-685P-201ENST00000517088 95 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC093788.1-201ENST00000609356 927 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC073114.1-201ENST00000612027 490 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AC091834.1-201ENST00000614543 472 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.17□□□□□ -2.06
RPAP3Q9H6T3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 SNORD115-7-201ENST00000365306 82 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 RNU6-282P-201ENST00000365357 103 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms