Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AC009318.2-201ENST00000610917 651 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 uc_338.11-201ENST00000619132 160 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AC068792.1-201ENST00000621354 417 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AC124864.2-201ENST00000624736 186 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 OR4G2P-201ENST00000328113 903 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RNU6-623P-201ENST00000363143 105 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RNU4-55P-201ENST00000410731 137 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RN7SKP284-201ENST00000411002 343 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RNU6-607P-201ENST00000411283 108 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 BX276092.3-201ENST00000424182 230 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 GMFBP1-201ENST00000467831 427 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC011005.2-201ENST00000487324 359 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC079382.1-201ENST00000493346 557 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC104136.1-201ENST00000512969 394 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC010493.1-201ENST00000513479 292 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AC008945.2-201ENST00000606056 604 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 AP001330.5-201ENST00000607176 411 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 RMST_4.1-201ENST00000616886 107 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.25□□□□□ -2.05
RNF41Q9H4P4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF41Q9H4P4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 RNU6-715P-201ENST00000365204 103 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 RNU6-1042P-201ENST00000384204 107 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 RNU6-45P-201ENST00000384471 107 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AL445685.2-201ENST00000422551 342 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC010095.1-201ENST00000443543 144 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 MTCO2P7-201ENST00000446518 666 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC073415.1-201ENST00000449240 153 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 ACA59.2-201ENST00000517061 156 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC104383.1-201ENST00000530297 370 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AP003034.1-201ENST00000534621 422 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 MTCO3P23-201ENST00000561363 289 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF41Q9H4P4 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 BNIP3P30-201ENST00000601184 574 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC078795.2-201ENST00000602835 1252 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 U6.42-201ENST00000618440 107 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 DUXAP9-208ENST00000622815 614 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 OR5AK4P-201ENST00000635912 903 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AP000553.5-201ENST00000641933 54 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 AC004520.1-201ENST00000608362 1413 ntBASIC2.24□□□□□ -2.05
RNF41Q9H4P4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 Y_RNA.409-201ENST00000383990 98 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 SNORA6-201ENST00000384033 151 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNU6-72P-201ENST00000384285 79 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 Y_RNA.517-201ENST00000384551 106 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNU6-1127P-201ENST00000384580 107 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 CALM2P3-201ENST00000400429 449 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 FTH1P15-201ENST00000406984 280 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNU2-29P-201ENST00000410423 189 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RNU4-46P-201ENST00000410818 138 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 MICF-203ENST00000432679 129 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 HMGN2P3-201ENST00000433603 273 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AL606489.2-201ENST00000433886 234 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 HMGN2P5-201ENST00000436882 273 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 FDX1P2-201ENST00000450769 375 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 BTF3P15-201ENST00000455606 336 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 snoU109.2-201ENST00000459316 135 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AL121769.1-201ENST00000469473 401 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 RPL7P43-201ENST00000478876 753 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC107401.1-201ENST00000503426 685 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC008121.1-201ENST00000603244 268 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC008536.2-201ENST00000607284 349 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 AC138627.2-201ENST00000624202 601 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 MIR6863-201ENST00000636112 90 ntBASIC2.23□□□□□ -2.05
RNF41Q9H4P4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms