Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 RNU4-40P-201ENST00000364351 143 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 OR5H15-201ENST00000383696 930 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 RNU1-57P-201ENST00000384491 166 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 SNORD70.1-201ENST00000391007 85 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 RNU2-23P-201ENST00000410545 195 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 PGBD4P6-201ENST00000421501 610 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AL451074.3-201ENST00000437709 472 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 SCARNA18-201ENST00000459004 134 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 RNU7-167P-201ENST00000459160 62 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AF213884.2-201ENST00000510417 903 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC104383.1-201ENST00000530297 370 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC023050.3-201ENST00000541142 333 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 MTND1P15-201ENST00000579262 949 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 VN1R107P-201ENST00000601784 209 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC012507.3-201ENST00000603556 477 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 SNORD14A-201ENST00000606526 91 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC002543.1-201ENST00000299783 1954 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNU6-858P-201ENST00000362436 107 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 SNORA70.4-201ENST00000365509 134 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 SNORD116-20-201ENST00000384529 92 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 MIR17-201ENST00000385012 84 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL591416.1-201ENST00000404015 867 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 SNORA11-201ENST00000408789 128 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC006946.1-201ENST00000429106 328 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 MTND3P21-201ENST00000433774 331 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC007969.2-201ENST00000441891 191 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 PRPS1P1-201ENST00000445305 876 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNU6-717P-201ENST00000459076 104 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNU6-261P-201ENST00000459506 102 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC112771.1-201ENST00000463581 102 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 SMURF2P1-201ENST00000514992 481 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP24-201ENST00000516478 95 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC109479.2-201ENST00000517842 174 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AP005902.1-201ENST00000521358 186 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AP001893.2-201ENST00000526949 202 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 PSMA3P-201ENST00000555485 635 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 MIR4319-201ENST00000577285 85 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 LARP7P3-201ENST00000579888 337 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC008749.1-201ENST00000597650 306 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL159153.1-201ENST00000619688 317 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL359880.1-201ENST00000621879 266 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AC124864.2-201ENST00000624736 186 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 MIR1291-201ENST00000627649 87 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 AL354685.2-201ENST00000448218 1447 ntBASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP125-201ENST00000364843 120 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP240-201ENST00000365355 128 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 Y_RNA.559-201ENST00000384686 107 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC068050.1-201ENST00000394891 380 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AL359511.1-201ENST00000402970 211 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP184-201ENST00000411071 108 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC096664.2-201ENST00000411843 406 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 UBE2V1P10-201ENST00000414685 269 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 HMGB1P31-201ENST00000437242 427 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 RPL7P12-201ENST00000446719 750 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 FDX1P2-201ENST00000450769 375 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 CYP2C59P-201ENST00000457790 269 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms